RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Vmn1r64Q8R2B8 320 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Znf445Q8R2V3 986 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 ChiaQ91XA9 473 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Hars2Q99KK9 505 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 RpgrQ9R0X5 1001 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Serpinb3cA2RSF9 386 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zfp457L7N1X4 647 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Cst8P32766 142 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mmp13P33435 472 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mmp14P53690 582 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mphosph8Q3TYA6 858 aaKnown RBP10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Q3UTZ3 580 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Spdye4aQ5IBH6 268 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Vmn2r43Q80Z08 845 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nrbp2Q91V36 499 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 4930519G04RikQ9CPT7 205 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nt5c3aQ9D020 331 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Rnf25Q9QZR0 456 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Speer3W4VSP1 261 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ankrd31A0A140LI88 1765 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Lipo2D3YY49 398 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Wdr95D3Z7A8 784 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ccdc175E9PVB3 822 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Gimd1E9PW74 217 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Gm15448F6PZL4 682 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ebf2O08792 575 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Srpk1O70551 648 aaKnown RBP10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Pias1O88907 651 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Epas1P97481 874 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ppp4r3cQ3V0Y1 813 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Cyb5d1Q5NCY3 228 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Shroom1Q5SX79 823 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Six1Q62231 284 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 RimklbQ80WS1 387 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Frmd4aQ8BIE6 1020 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Gbp9Q8BTS3 619 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Tgif2lx2Q8K5B9 231 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 PnkpQ9JLV6 522 aaKnown RBP10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Kifc1Q9QWT9 674 aa10.89□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zscan4-ps1A0A1C7CYV3 506 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zfp612A0A1D5RMC2 672 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zscan4dA7KBS4 506 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Abcb5B5X0E4 1255 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ttc7bE9Q6P5 843 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Barx2O08686 283 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Snx3O70492 162 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Tnnc2P20801 160 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 SnrpfP62307 86 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 VegfaQ00731 214 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 NfiaQ02780 532 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Caprin2Q05A80 1031 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zscan4fQ3URS2 506 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Syce2Q505B8 171 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Tcf4Q60722 670 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Vil1Q62468 827 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ptk6Q64434 451 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Slc9c1Q6UJY2 1175 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zscan4cQ80VJ6 506 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Clec4gQ8BNX1 294 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ttc39bQ8BYY4 617 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Slc39a13Q8BZH0 361 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Wdr60Q8C761 999 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ephb1Q8CBF3 984 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nde1Q9CZA6 344 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mms19Q9D071 1031 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ankef1Q9D2J7 775 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mpp2Q9WV34 552 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ptgdr2Q9Z2J6 382 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Itga9B8JK39 1036 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Gm379J3QQ19 296 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Lzts1P60853 599 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Rab6bP61294 208 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 FerP70451 823 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 VcpQ01853 806 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Prmt9Q3U3W5 846 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Dpysl3Q62188 570 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ccdc117Q6PB51 277 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Serpinb3dQ6UKZ0 387 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nsun6Q7TS68 476 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zfp454Q80Y34 536 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Rbbp5Q8BX09 538 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Tceal1Q921P9 165 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Trmt10bQ9D075 318 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Mta2Q9R190 668 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nup98Q6PFD9 1816 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 2210011C24RikA0A087WQ89 206 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Prdm15E9Q8T2 1174 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zfp275G3X904 499 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Tekt5G5E8A8 557 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Birc5O70201 140 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Hspa1lP16627 641 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 AmhP27106 555 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Nt5c2Q3V1L4 560 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Zdhhc18Q5Y5T2 380 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Znf579Q80VM4 562 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Creb3l2Q8BH52 521 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Sugp1Q8CH02 643 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Ddx56Q9D0R4 546 aaKnown RBP10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 MlklQ9D2Y4 472 aa10.88□□□□□ -0.67
Echdc1-201ENSMUST00000020034 Taf7lQ9D3R9 471 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms