RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Hdac9Q99N13 588 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Q9CPS8 106 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Speer3W4VSP1 261 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Eef1bO70251 225 aaKnown RBP17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Prim2P33610 505 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Snap25P60879 206 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Arl4cP61208 192 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Als2clQ60I26 952 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Rbm12b1Q80YR9 836 aaKnown RBP17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 PigwQ8C398 503 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 XkQ9QXY7 446 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ptpn4Q9WU22 926 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tnk2O54967 1055 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ca8P28651 291 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pex2P55098 305 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Gm4981Q3ULJ8 291 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ssxb5Q6XAS2 159 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Acap2Q6ZQK5 770 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Eif2aQ8BJW6 581 aaKnown RBP17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Trim61Q8JZK6 461 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Thg1lQ9CY52 298 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 IdeQ9JHR7 1019 aa17.76■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Arhgef10Q8C033 1345 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Zscan4-ps3A0A1B0GRH6 506 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Zscan4-ps2A0A1C7CYU6 506 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Gm15155B1B034 138 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ppp1r36D3Z0R2 411 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 GsrP47791 500 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fam172aQ3TNH5 417 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ag2Q3UPL5 249 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Nell2Q61220 819 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Arid3aQ62431 601 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Dusp16Q6PCP3 660 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Raver2Q7TPD6 673 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 NfascQ810U3 1240 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Q8BGA7 448 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Echs1Q8BH95 290 aaKnown RBP17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 SmapQ9R0P4 181 aaKnown RBP17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 DgkkE9Q7N4 1118 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fignl2J3QK54 644 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 AgxtO35423 414 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 AcadsQ07417 412 aaKnown RBP17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Vwa3aQ3UVV9 1148 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fam129aQ3UW53 926 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 HmcesQ8R1M0 353 aaKnown RBP17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 CtsfQ9R013 462 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Grpel2O88396 224 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 DmpkP54265 631 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Glt6d1Q2NKH9 311 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Cage1Q5IR70 849 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Hoxa13Q62424 386 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fam107aQ78TU8 144 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ms4a5Q810P8 197 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tmem161bQ8C2L6 487 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pls3Q99K51 630 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc22a3Q9WTW5 551 aa17.75■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ebf3O08791 596 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 PtgisO35074 501 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc16a2O70324 545 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Myl4P09541 193 aaKnown RBP17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Il1rapl1P59823 695 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Znf112Q0VAW7 879 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Olfr299Q7TS05 330 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc36a3Q811P0 477 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Serpinb13Q8CDC0 389 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pop1Q8K205 1045 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Vps36Q91XD6 386 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Cyp11b2P15539 500 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ccnd2P30280 289 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Kcnj6P48542 425 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Rpl26P61255 145 aaKnown RBP17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 SnnP61807 88 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 LxnP70202 222 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ddb1Q3U1J4 1140 aaKnown RBP17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Trip10Q8CJ53 603 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Psd3Q2PFD7 1037 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc17a7Q3TXX4 560 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tmem102Q3UPR7 509 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Clec4gQ8BNX1 294 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Il33Q8BVZ5 266 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Taf2Q8C176 1104 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Kiaa0391Q8JZY4 584 aaKnown RBP17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Clptm1Q8VBZ3 664 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Mipol1Q9D9F8 279 aa17.74■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Klhl41A2AUC9 606 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Mfsd4b4J3QNS5 503 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Vmn2r15L7N2A0 855 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Gm3264L7N2C5 238 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 ArP19091 899 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 OatP29758 439 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ppm1jQ149T7 507 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Lamc2Q61092 1191 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ptk6Q64434 451 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Rhot1Q8BG51 631 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tlk1Q8C0V0 766 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tmco1Q921L3 188 aaKnown RBP17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pdia5Q921X9 517 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Usp29Q9ES63 869 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Serpinb8O08800 374 aaKnown RBP17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Chil3O35744 398 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms