RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Unc5cO08747 931 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Anxa8O35640 327 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 PkmP52480 531 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gucy2eP52785 1108 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rmdn3Q3UJU9 470 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Kctd8Q50H33 476 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Plk4Q64702 925 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Stx3Q64704 289 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Hmgb4Q6P8W9 181 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pip5kl1Q6U7H8 395 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Zswim6Q80TB7 1207 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ugt3a2Q8JZZ0 523 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Nrbp2Q91V36 499 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Nuf2Q99P69 463 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gys1Q9Z1E4 738 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 NesQ6P5H2 1864 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rabgap1A2AWA9 1064 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Speer4f2E9Q366 295 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pias1O88907 651 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Psma2P49722 234 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Msx2Q03358 267 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Spag6Q3V0U9 509 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pla2g4cQ64GA5 597 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 NostrinQ6WKZ7 506 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rps6kc1Q8BLK9 1056 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ptrh1Q8BW00 204 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Galnt5Q8C102 930 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 HnmtQ91VF2 295 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Xpo5Q924C1 1204 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pacsin3Q99JB8 424 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tssk3Q9D2E1 268 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Taf7lQ9D3R9 471 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 1700024B05RikE9Q6D7 167 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Srpk1O70551 648 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Apba3O88888 571 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 AdssP46664 456 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Q14AM7 275 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Arid5aQ3U108 590 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Cyp2j11Q3UNV2 504 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Syce2Q505B8 171 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Xlr3cQ61806 226 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Sh3rf1Q69ZI1 892 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ip6k2Q80V72 448 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 C2cd2lQ80X80 706 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Znf426Q8R1D1 550 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 FechP22315 420 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rad54lP70270 747 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Sycp3P70281 254 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Cdk16Q04735 496 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Fbln1Q08879 705 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Emc10Q3TAS6 258 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Vmn2r43Q80Z08 845 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Dach2Q925Q8 634 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 ParvaQ9EPC1 372 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Astn1Q61137 1302 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Kat6bQ8BRB7 1872 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 FAM186AQ9D9R9 1790 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Duox1A2AQ92 1551 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Myh7bA2AQP0 1941 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Aknad1E9Q8N6 675 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pde4aO89084 844 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Msr1P30204 458 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Atp13a3Q5XF89 1219 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Stxbp2Q64324 593 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Actr5Q80US4 605 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Dars2Q8BIP0 653 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Mtrf1lQ8BJU9 373 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Dcun1d2Q8BZJ7 259 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Micu3Q9CTY5 523 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tdrd12Q9CWU0 1215 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tekt1Q9DAJ2 418 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tbk1Q9WUN2 729 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Zc3h7aE9PWW6 970 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Cdo1P60334 200 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ptprn2P80560 1001 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tmem65Q4VAE3 234 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Snx19Q6P4T1 997 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pcmtd2Q8BHD8 359 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ssx2ipQ8VC66 615 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 PlvapQ91VC4 438 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pdk2Q9JK42 407 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pex5O09012 639 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Slc12a1P55014 1095 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ext2P70428 718 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Meis2P97367 477 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rufy4Q3TYX8 563 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Fam8a1Q3URQ4 399 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Capn13Q3UW68 665 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Oog4Q4G0C7 502 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Psen2Q61144 448 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ipo5Q8BKC5 1097 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ccdc134Q8C7V8 229 aa13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Nmd3Q99L48 503 aaKnown RBP13.35□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Znf638Q61464 1960 aaKnown RBP13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Cacna1sQ02789 1880 aa13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Agxt2Q3UEG6 513 aa13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Prkaa1Q5EG47 559 aa13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Uba3Q8C878 462 aa13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Prpf31Q8CCF0 499 aaKnown RBP13.34□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Adprhl2Q8CG72 370 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms