RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SENP8Q96LD8 212 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 COL4A6Q14031 1691 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 FOXN3O00409 490 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-230ENST00000641927 JAM2P57087 298 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 YWHAEP62258 255 aaKnown RBP18.7■□□□□ 0.58
PHGDH-230ENST00000641927 ARID5BQ14865 1188 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 TIGD5Q53EQ6 642 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 SFMBT2Q5VUG0 894 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 FIBCD1Q8N539 461 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 TC2NQ8N9U0 490 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 OR8K1Q8NGG5 319 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 FAXDC2Q96IV6 333 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 GDF15Q99988 308 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 BCO2Q9BYV7 579 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 NUCKS1Q9H1E3 243 aaKnown RBP18.7■□□□□ 0.58
PHGDH-230ENST00000641927 CISHQ9NSE2 258 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 ABHD10Q9NUJ1 306 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 PCDHB4Q9Y5E5 795 aa18.7■□□□□ 0.58
PHGDH-230ENST00000641927 GFPT2O94808 682 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 SOX5P35711 763 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 RABGGTBP53611 331 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 SHC3Q92529 594 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ZNF558Q96NG5 402 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 GPR88Q9GZN0 384 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 SDCBP2Q9H190 292 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 CYP3A43Q9HB55 503 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ZNHIT6Q9NWK9 470 aaKnown RBP18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ADAM28Q9UKQ2 775 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 CEP290O15078 2479 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 TMEM189-UBE2V1I3L0A0 370 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 TRAPPC3O43617 180 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ODC1P11926 461 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 LAG3P18627 525 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 PAX3P23760 479 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ASIC2Q16515 512 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 SOWAHAQ2M3V2 549 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 ZNF394Q53GI3 561 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 KCNT2Q6UVM3 1135 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 MRPL45Q9BRJ2 306 aaKnown RBP18.69■□□□□ 0.58
PHGDH-230ENST00000641927 MYO6Q9UM54 1294 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 L1RE1Q9UN81 338 aa18.69■□□□□ 0.58
PHGDH-230ENST00000641927 TIMM13Q9Y5L4 95 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-230ENST00000641927 GRXCR1A8MXD5 290 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.58
PHGDH-230ENST00000641927 RGS19P49795 217 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-230ENST00000641927 ADGRF2Q8IZF7 708 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 PDCL2Q8N4E4 241 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 TOP6BLQ8N6T0 577 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 DNAJC7Q99615 494 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 SNX25Q9H3E2 840 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 AAASQ9NRG9 546 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 MARCH5Q9NX47 278 aa18.68■□□□□ 0.58
PHGDH-230ENST00000641927 LCHNA4D1U4 455 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 CYP26A1O43174 497 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 ACO1P21399 889 aaKnown RBP18.67■□□□□ 0.58
PHGDH-230ENST00000641927 WSCD1Q658N2 575 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 FAM109BQ6ICB4 259 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-230ENST00000641927 DPH6Q7L8W6 267 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 FMNL3Q8IVF7 1028 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 FAM71AQ8IYT1 594 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 COLGALT1Q8NBJ5 622 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 SUSD3Q96L08 255 aa18.67■□□□□ 0.58
PHGDH-230ENST00000641927 SF3B1O75533 1304 aaKnown RBP eCLIP18.67■□□□□ 0.583e-6■■■■■ 100.2
PHGDH-230ENST00000641927 TNRC18O15417 2968 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-230ENST00000641927 ARHGEF37A1IGU5 675 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 CCDC172P0C7W6 258 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 FERP16591 822 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 E4F1Q66K89 784 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 METTL23Q86XA0 190 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 CEP57Q86XR8 500 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 TTC39CQ8N584 583 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 RBBP8NLQ8NC74 664 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 PANX2Q96RD6 677 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 PCDHB12Q9Y5F1 795 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 M0QZQ0 153 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 TACC1O75410 805 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 MYOGP15173 224 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 NDST1P52848 882 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 ORC1Q13415 861 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 FAM171A1Q5VUB5 890 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 FUT10Q6P4F1 479 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 TMEM86AQ8N2M4 240 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 UBR7Q8N806 425 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 BCL7CQ8WUZ0 217 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 KBTBD7Q8WVZ9 684 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 SYN2Q92777 582 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 TMEM169Q96HH4 297 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 GPR62Q9BZJ7 368 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 SPG21Q9NZD8 308 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 AIPL1Q9NZN9 384 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 HMGXB4Q9UGU5 601 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 PUF60Q9UHX1 559 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms