RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CXCL16Q9H2A7 254 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CEP72Q9P209 647 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 SYN3O14994 580 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 UCHL3P15374 230 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 PCSK1P29120 753 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CDC25BP30305 580 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 PBX3P40426 434 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 STAT1P42224 750 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 LHX1P48742 406 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 SMAD3P84022 425 aaKnown RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 TSPY1Q01534 308 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 YWHAHQ04917 246 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 KLHDC7AQ5VTJ3 777 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 FAM171A1Q5VUB5 890 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 SPOPLQ6IQ16 392 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 ZNF280DQ6N043 979 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CNGA4Q8IV77 575 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 VSTM4Q8IW00 320 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 SEMA4DQ92854 862 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 IGSF21Q96ID5 467 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 TNIP3Q96KP6 325 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 TTYH1Q9H313 450 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 FAM124BQ9H5Z6 455 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CWH43Q9H720 699 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 GDAP2Q9NXN4 497 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CACNG4Q9UBN1 327 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
PHGDH-218ENST00000641491 CITO14578 2027 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 TTC3P53804 2025 aa13.86□□□□□ -0.19
PHGDH-218ENST00000641491 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 LINC01553A4QN01 128 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 GRXCR1A8MXD5 290 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 A8MXQ7 604 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 PPEF2O14830 753 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 LRRN2O75325 713 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 FGF18O76093 207 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 RB1P06400 928 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 FOSL2P15408 326 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 BMPR1AP36894 532 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 BRCC3P46736 316 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 BPIFB4P59827 614 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-218ENST00000641491 NAB2Q15742 525 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 TJAP1Q5JTD0 557 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 OVOS1Q6IE37 1185 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
PHGDH-218ENST00000641491 SLC39A11Q8N1S5 342 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 SPATA18Q8TC71 538 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-218ENST00000641491 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 OXCT2Q9BYC2 517 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-218ENST00000641491 EDEM3Q9BZQ6 932 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 NKX2-4Q9H2Z4 354 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
PHGDH-218ENST00000641491 AKR1B15C9JRZ8 316 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-218ENST00000641491 TYMPP19971 482 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 GNL1P36915 607 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-218ENST00000641491 GLUD2P49448 558 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 KLK7P49862 253 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 PDE6CP51160 858 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 SLC8A3P57103 927 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 ASIC2Q16515 512 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 SFMBT2Q5VUG0 894 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
PHGDH-218ENST00000641491 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 NT5C1AQ9BXI3 368 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 STK33Q9BYT3 514 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
PHGDH-218ENST00000641491 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms