RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 BPIFB4P59827 614 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 TUSC3Q13454 348 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 SLC18A3Q16572 532 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 ABI1Q8IZP0 508 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-214ENST00000641314 KCND1Q9NSA2 647 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 PUF60Q9UHX1 559 aaKnown RBP18.81■□□□□ 0.6
PHGDH-214ENST00000641314 CNTN6Q9UQ52 1028 aa18.81■□□□□ 0.6
PHGDH-214ENST00000641314 MICAL3Q7RTP6 2002 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 A0A0U1RQJ8 604 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 DDX3XO00571 662 aaKnown RBP eCLIP18.8■□□□□ 0.6
PHGDH-214ENST00000641314 INPPL1O15357 1258 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 ZNF500O60304 480 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-214ENST00000641314 LCA5LO95447 670 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 GATMP50440 423 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 LILRA4P59901 499 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 BMS1Q14692 1282 aaKnown RBP18.8■□□□□ 0.6
PHGDH-214ENST00000641314 MFSD5Q6N075 450 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 REXO1L1PQ8IX06 675 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 TMEM199Q8N511 208 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 ATRIPQ8WXE1 791 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 SYT11Q9BT88 431 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 PCDHA13Q9Y5I0 950 aa18.8■□□□□ 0.6
PHGDH-214ENST00000641314 FAM170AA1A519 330 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 MMEP08473 750 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 GNA15P30679 374 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 RPL9P32969 192 aaKnown RBP18.79■□□□□ 0.6
PHGDH-214ENST00000641314 MAGEA1P43355 309 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 ZNF132P52740 706 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 CDR2Q01850 454 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 RNASELQ05823 741 aaKnown RBP18.79■□□□□ 0.6
PHGDH-214ENST00000641314 ORC1Q13415 861 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.79■□□□□ 0.6
PHGDH-214ENST00000641314 OLIG1Q8TAK6 271 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 MRPL45Q9BRJ2 306 aaKnown RBP18.79■□□□□ 0.6
PHGDH-214ENST00000641314 PAAF1Q9BRP4 392 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 LZTFL1Q9NQ48 299 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 HMGXB4Q9UGU5 601 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 ALPK3Q96L96 1907 aa18.79■□□□□ 0.6
PHGDH-214ENST00000641314 THAP12O43422 761 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 CHRNB2P17787 502 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 IGFBP6P24592 240 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-214ENST00000641314 NPAS4Q8IUM7 802 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
PHGDH-214ENST00000641314 FAM193BQ96PV7 902 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-214ENST00000641314 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 GDAP2Q9NXN4 497 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 KANSL3Q9P2N6 904 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
PHGDH-214ENST00000641314 TMCO5BA8MYB1 307 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 HOXA2O43364 376 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 HUS1O60921 280 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 CILPO75339 1184 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 UPP2O95045 317 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 ACRP10323 421 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 VAV2P52735 878 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 NDST1P52848 882 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 FMO1Q01740 532 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 UPP1Q16831 310 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 SOWAHAQ2M3V2 549 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 ALKBH5Q6P6C2 394 aaKnown RBP18.77■□□□□ 0.6
PHGDH-214ENST00000641314 ZNF280BQ86YH2 543 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 TTC39CQ8N584 583 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 C3orf58Q8NDZ4 430 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 SLC30A5Q8TAD4 765 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 DDX1Q92499 740 aaKnown RBP18.77■□□□□ 0.6
PHGDH-214ENST00000641314 UROC1Q96N76 676 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 TWNKQ96RR1 684 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 ELOVL4Q9GZR5 314 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 LUC7LQ9NQ29 371 aaKnown RBP18.77■□□□□ 0.6
PHGDH-214ENST00000641314 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-214ENST00000641314 BARX2Q9UMQ3 279 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-214ENST00000641314 TTC3P53804 2025 aa18.77■□□□□ 0.6
PHGDH-214ENST00000641314 GOLGA6L9A6NEM1 432 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 DDHD2O94830 711 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 CD19P15391 556 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 BRD2P25440 801 aaKnown RBP18.76■□□□□ 0.59
PHGDH-214ENST00000641314 SSTR3P32745 418 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-214ENST00000641314 RAD23BP54727 409 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 INCA1Q0VD86 236 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 PAN2Q504Q3 1202 aaKnown RBP18.76■□□□□ 0.59
PHGDH-214ENST00000641314 ARHGAP29Q52LW3 1261 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 DSTYKQ6XUX3 929 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 ZNF677Q86XU0 584 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 DNAAF5Q86Y56 855 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 PALB2Q86YC2 1186 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 APPL2Q8NEU8 664 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 OR6B3Q8NGW1 331 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 WHAMMQ8TF30 809 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 HASPINQ8TF76 798 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 PCDHB18PQ96TA0 734 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 L1RE1Q9UN81 338 aa18.76■□□□□ 0.59
PHGDH-214ENST00000641314 ABHD14A-ACY1A0A1B0GW23 586 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms