RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FGFR3P22607 806 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 TBXAS1P24557 533 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 HNRNPH3P31942 346 aaKnown RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 MLLT1Q03111 559 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 MYO1EQ12965 1108 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 CUL2Q13617 745 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 ZNF699Q32M78 642 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 WDR72Q3MJ13 1102 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 SV2CQ496J9 727 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 PAN2Q504Q3 1202 aaKnown RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 ZNF667Q5HYK9 610 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 FAM117BQ6P1L5 589 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 GJB7Q6PEY0 223 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 COLGALT1Q8NBJ5 622 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 KBTBD7Q8WVZ9 684 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 IGSF21Q96ID5 467 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 SENP8Q96LD8 212 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 NT5C1BQ96P26 610 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 COLEC11Q9BWP8 271 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 LSM14BQ9BX40 385 aaKnown RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 STK33Q9BYT3 514 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 OCEL1Q9H607 264 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 CHST7Q9NS84 486 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 CEP72Q9P209 647 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 FAN1Q9Y2M0 1017 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
SCARB2-225ENST00000640900 NME7Q9Y5B8 376 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 FHOD1Q9Y613 1164 aa9.78□□□□□ -0.84
SCARB2-225ENST00000640900 TSC2P49815 1807 aa9.77□□□□□ -0.84
SCARB2-225ENST00000640900 GBF1Q92538 1859 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 PES1O00541 588 aaKnown RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 SYN3O14994 580 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 LILRB3O75022 631 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 OAZ2O95190 189 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 KRT19P08727 400 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 FECHP22830 423 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 WARSP23381 471 aaKnown RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 BMPR1AP36894 532 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 ALDH7A1P49419 539 aaKnown RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 RABGGTBP53611 331 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 ERVK-21P61565 698 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 TAP1Q03518 808 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 TRIM14Q14142 442 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 WDR44Q5JSH3 913 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 FAM71AQ8IYT1 594 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 PDCL2Q8N4E4 241 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 FIBCD1Q8N539 461 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 TTC39CQ8N584 583 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 RABGGTAQ92696 567 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 SYN2Q92777 582 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 KAT5Q92993 513 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 ZNF558Q96NG5 402 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 FAM193BQ96PV7 902 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 ARID3AQ99856 593 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 RTP3Q9BQQ7 232 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 GPR62Q9BZJ7 368 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 SMYD3Q9H7B4 428 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 FAM207AQ9NSI2 230 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 IMPACTQ9P2X3 320 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 DNAJC12Q9UKB3 198 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 L1RE1Q9UN81 338 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 POLIQ9UNA4 740 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.77□□□□□ -0.85
SCARB2-225ENST00000640900 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
SCARB2-225ENST00000640900 F8VZ95 297 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 FOXN3O00409 490 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 CYB561D2O14569 222 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 CILPO75339 1184 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 RB1P06400 928 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 P4HA1P13674 534 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 MYOGP15173 224 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 PPM1AP35813 382 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 BRCC3P46736 316 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 OR1G1P47890 313 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 FXR1P51114 621 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 POLR2FP61218 127 aaKnown RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SMAD3P84022 425 aaKnown RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 ELAVL2Q12926 359 aaKnown RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 DRAP1Q14919 205 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 LRIT3Q3SXY7 679 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 WSCD1Q658N2 575 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 RRAGAQ7L523 313 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 UNC93AQ86WB7 457 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 OSTM1Q86WC4 334 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 CRYBG2Q8N1P7 616 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM86AQ8N2M4 240 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 CCDC150Q8NCX0 1101 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms