RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ATP9BO43861 1147 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 GPD1P21695 349 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 FBXO16Q8IX29 292 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 DNERQ8NFT8 737 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 AGAP3Q96P47 875 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 SPATC1LQ9H0A9 340 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ZC3H7BQ9UGR2 993 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 TTC4O95801 387 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 HOXD10P28358 340 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 MPZL3Q6UWV2 235 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 METTL7BQ6UX53 244 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ZNF473Q8WTR7 871 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 CGRRF1Q99675 332 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 MAGEB5Q9BZ81 275 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ROPN1BQ9BZX4 212 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ROPN1Q9HAT0 212 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 XPO7Q9UIA9 1087 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 CCDC195A0A1B0GUA6 201 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 RPS6KA5O75582 802 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 NPTXRO95502 500 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 CPB1P15086 417 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 HUNKP57058 714 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 C4orf33Q8N1A6 199 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ATP8B4Q8TF62 1192 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 XPO6Q96QU8 1125 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 FAM96AQ9H5X1 160 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 PLEKHA5Q9HAU0 1116 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 PSD3Q9NYI0 1048 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 DLG5Q8TDM6 1919 aa18.46■□□□□ 0.55
SCARB2-223ENST00000640640 PABPC3Q9H361 631 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
SCARB2-223ENST00000640640 PHF20L1A8MW92 1017 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SPECC1L-ADORA2AF8WAN1 911 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 KRT10P13645 584 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 OCRLQ01968 901 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 KCNA1Q09470 495 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SLC12A1Q13621 1099 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 CCNYL1Q8N7R7 359 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 LRRN4CLQ8ND94 238 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 OR6P1Q8NGX9 317 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 PDCD6IPQ8WUM4 868 aaKnown RBP18.45■□□□□ 0.54
SCARB2-223ENST00000640640 ATG4AQ8WYN0 398 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 IFT43Q96FT9 208 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 VPS33BQ9H267 617 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SEC24CP53992 1094 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 GNASQ5JWF2 1037 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 ACSF2Q96CM8 615 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SPON2Q9BUD6 331 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 ANKZF1Q9H8Y5 726 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 BAG5Q9UL15 447 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 PPP2R3BQ9Y5P8 575 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 TGFB3P10600 412 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 ZNF484Q5JVG2 852 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SGSM3Q96HU1 749 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 TLR10Q9BXR5 811 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 VCX3AQ9NNX9 186 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 H0Y3Z8 333 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SLC26A2P50443 739 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 POU5F1BQ06416 359 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 EP400NLQ6ZTU2 488 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SPATA21Q7Z572 469 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 DNAJC19Q96DA6 116 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 RANBP17Q9H2T7 1088 aaKnown RBP18.45■□□□□ 0.54
SCARB2-223ENST00000640640 PAK5Q9P286 719 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 SIK3Q9Y2K2 1263 aa18.45■□□□□ 0.54
SCARB2-223ENST00000640640 ACADSBP45954 432 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 TAF11Q15544 211 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 BOLA3Q53S33 107 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 C3orf62Q6ZUJ4 267 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 RAPGEF5Q92565 580 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 SERPINI1Q99574 410 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 SP110Q9HB58 689 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 PSMC3IPQ9P2W1 217 aaPredicted RBP18.44■□□□□ 0.54
SCARB2-223ENST00000640640 CHUKO15111 745 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 TRAPPC3O43617 180 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 PRAMEP78395 509 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 SV2CQ496J9 727 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 GLRA4Q5JXX5 417 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 FBXO25Q8TCJ0 367 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 SPIRE2Q8WWL2 714 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 PSTPIP1O43586 416 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 GNL1P36915 607 aaPredicted RBP18.44■□□□□ 0.54
SCARB2-223ENST00000640640 CASP5P51878 434 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 DEUP1Q05D60 604 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 GOLGA7BQ2TAP0 167 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 DCAF6Q58WW2 860 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 TATDN2Q93075 761 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 EFHD1Q9BUP0 239 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 SLC38A7Q9NVC3 462 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 POLIQ9UNA4 740 aa18.44■□□□□ 0.54
SCARB2-223ENST00000640640 TMEM120BA0PK00 339 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 FAM47DPA6NHR8 397 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 ITGA4P13612 1032 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 CACNB2Q08289 660 aaPredicted RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 C1orf186Q6ZWK4 172 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 DPP3Q9NY33 737 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms