RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 CD4P01730 458 aa8.83□□□□□ -1
PNKP-231ENST00000640501 VTNP04004 478 aa8.83□□□□□ -1
PNKP-231ENST00000640501 HMGCRP04035 888 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ITGB3P05106 788 aa8.83□□□□□ -1
PNKP-231ENST00000640501 EDN1P05305 212 aa8.83□□□□□ -1
PNKP-231ENST00000640501 GLI1P08151 1106 aa8.83□□□□□ -1
PNKP-231ENST00000640501 VDRP11473 427 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CYP2C9P11712 490 aa8.83□□□□□ -1
PNKP-231ENST00000640501 AKR1A1P14550 325 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CD19P15391 556 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ARF4P18085 180 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 CDH5P33151 784 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 PNPLA4P41247 253 aa8.83□□□□□ -1
PNKP-231ENST00000640501 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 PEX5P50542 639 aa8.83□□□□□ -1
PNKP-231ENST00000640501 EIF3BP55884 814 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 COPS2P61201 443 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CAV1Q03135 178 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CALCOCO2Q13137 446 aa8.83□□□□□ -1
PNKP-231ENST00000640501 MFSD10Q14728 455 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ACAP1Q15027 740 aa8.83□□□□□ -1
PNKP-231ENST00000640501 TERF2Q15554 542 aa8.83□□□□□ -1
PNKP-231ENST00000640501 HADHQ16836 314 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
PNKP-231ENST00000640501 LRRC38Q5VT99 294 aa8.83□□□□□ -1
PNKP-231ENST00000640501 EEF1DP3Q658K8 133 aa8.83□□□□□ -1
PNKP-231ENST00000640501 PLEKHA7Q6IQ23 1121 aa8.83□□□□□ -1
PNKP-231ENST00000640501 TAF2Q6P1X5 1199 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CCDC137Q6PK04 289 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 LRIG3Q6UXM1 1119 aa8.83□□□□□ -1
PNKP-231ENST00000640501 RUFY4Q6ZNE9 571 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 SLC13A5Q86YT5 568 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 RASAL3Q86YV0 1011 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CCDC50Q8IVM0 306 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CCDC105Q8IYK2 499 aa8.83□□□□□ -1
PNKP-231ENST00000640501 UBR7Q8N806 425 aa8.83□□□□□ -1
PNKP-231ENST00000640501 C7orf31Q8N865 590 aa8.83□□□□□ -1
PNKP-231ENST00000640501 C12orf50Q8NA57 414 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 HDAC7Q8WUI4 952 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CD101Q93033 1021 aa8.83□□□□□ -1
PNKP-231ENST00000640501 MAGOHBQ96A72 148 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 HPDLQ96IR7 371 aa8.83□□□□□ -1
PNKP-231ENST00000640501 C11orf70Q9BRQ4 267 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ERP44Q9BS26 406 aa8.83□□□□□ -1
PNKP-231ENST00000640501 BCO2Q9BYV7 579 aa8.83□□□□□ -1
PNKP-231ENST00000640501 DDX47Q9H0S4 455 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 R3HDMLQ9H3Y0 253 aa8.83□□□□□ -1
PNKP-231ENST00000640501 DPP3Q9NY33 737 aa8.83□□□□□ -1
PNKP-231ENST00000640501 SMARCAL1Q9NZC9 954 aa8.83□□□□□ -1
PNKP-231ENST00000640501 VPS18Q9P253 973 aa8.83□□□□□ -1
PNKP-231ENST00000640501 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 PCYOX1Q9UHG3 505 aa8.83□□□□□ -1
PNKP-231ENST00000640501 CPA4Q9UI42 421 aa8.83□□□□□ -1
PNKP-231ENST00000640501 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
PNKP-231ENST00000640501 C17orf102A2RUQ5 167 aa8.82□□□□□ -1
PNKP-231ENST00000640501 GPR25O00155 361 aa8.82□□□□□ -1
PNKP-231ENST00000640501 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
PNKP-231ENST00000640501 TJP3O95049 919 aa8.82□□□□□ -1
PNKP-231ENST00000640501 KRT7P08729 469 aa8.82□□□□□ -1
PNKP-231ENST00000640501 SMIM10L2AP0DMW4 78 aa8.82□□□□□ -1
PNKP-231ENST00000640501 SMIM10L2BP0DMW5 78 aa8.82□□□□□ -1
PNKP-231ENST00000640501 ASPAP45381 313 aa8.82□□□□□ -1
PNKP-231ENST00000640501 CARSP49589 748 aaKnown RBP8.82□□□□□ -1
PNKP-231ENST00000640501 PSEN2P49810 448 aa8.82□□□□□ -1
PNKP-231ENST00000640501 FCGRTP55899 365 aa8.82□□□□□ -1
PNKP-231ENST00000640501 WNT7BP56706 349 aa8.82□□□□□ -1
PNKP-231ENST00000640501 MAMLD1Q13495 774 aa8.82□□□□□ -1
PNKP-231ENST00000640501 SLMAPQ14BN4 828 aa8.82□□□□□ -1
PNKP-231ENST00000640501 PPP1R7Q15435 360 aa8.82□□□□□ -1
PNKP-231ENST00000640501 AMHR2Q16671 573 aa8.82□□□□□ -1
PNKP-231ENST00000640501 CYP1B1Q16678 543 aa8.82□□□□□ -1
PNKP-231ENST00000640501 PTPROQ16827 1216 aa8.82□□□□□ -1
PNKP-231ENST00000640501 SGO2Q562F6 1265 aa8.82□□□□□ -1
PNKP-231ENST00000640501 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
PNKP-231ENST00000640501 MFSD14CQ5VZR4 134 aa8.82□□□□□ -1
PNKP-231ENST00000640501 JADE1Q6IE81 842 aa8.82□□□□□ -1
PNKP-231ENST00000640501 MMS22LQ6ZRQ5 1243 aa8.82□□□□□ -1
PNKP-231ENST00000640501 DNAAF5Q86Y56 855 aa8.82□□□□□ -1
PNKP-231ENST00000640501 IFNL1Q8IU54 200 aa8.82□□□□□ -1
PNKP-231ENST00000640501 PASD1Q8IV76 773 aa8.82□□□□□ -1
PNKP-231ENST00000640501 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
PNKP-231ENST00000640501 KATNAL2Q8IYT4 538 aa8.82□□□□□ -1
PNKP-231ENST00000640501 RCOR2Q8IZ40 523 aa8.82□□□□□ -1
PNKP-231ENST00000640501 KIAA0319LQ8IZA0 1049 aa8.82□□□□□ -1
PNKP-231ENST00000640501 ARFGAP2Q8N6H7 521 aa8.82□□□□□ -1
PNKP-231ENST00000640501 LRRC52Q8N7C0 313 aa8.82□□□□□ -1
PNKP-231ENST00000640501 C3orf20Q8ND61 904 aa8.82□□□□□ -1
PNKP-231ENST00000640501 C1orf131Q8NDD1 294 aaKnown RBP8.82□□□□□ -1
PNKP-231ENST00000640501 EXD1Q8NHP7 514 aa8.82□□□□□ -1
PNKP-231ENST00000640501 NPLOC4Q8TAT6 608 aa8.82□□□□□ -1
PNKP-231ENST00000640501 FAM76AQ8TAV0 307 aa8.82□□□□□ -1
PNKP-231ENST00000640501 CASKIN2Q8WXE0 1202 aa8.82□□□□□ -1
PNKP-231ENST00000640501 SEC14L1Q92503 715 aa8.82□□□□□ -1
PNKP-231ENST00000640501 KIF12Q96FN5 646 aa8.82□□□□□ -1
PNKP-231ENST00000640501 TMEM176AQ96HP8 235 aa8.82□□□□□ -1
PNKP-231ENST00000640501 ZNF560Q96MR9 790 aa8.82□□□□□ -1
PNKP-231ENST00000640501 FMO2Q99518 471 aa8.82□□□□□ -1
PNKP-231ENST00000640501 PTPN18Q99952 460 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms