RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	OMA1	Q96E52	524 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	CCDC90B	Q9GZT6	254 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	RSL24D1	Q9UHA3	163 aa	Known RBP	11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	COQ6	Q9Y2Z9	468 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	TELO2	Q9Y4R8	837 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	AP4S1	Q9Y587	144 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	GPR75-ASB3	A0A0A6YYF3	556 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	TMEM247	A6NEH6	219 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	POTEC	B2RU33	542 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	SNAP23	O00161	211 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	NR3C1	P04150	777 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	KRT1	P04264	644 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	HNRNPH3	P31942	346 aa	Known RBP	11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	PERM1	Q5SV97	790 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	PPP4R3CP	Q6ZMV5	832 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	RNF19B	Q6ZMZ0	732 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	BAP1	Q92560	729 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	ISCA1	Q9BUE6	129 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	UPF3A	Q9H1J1	476 aa	Known RBP	11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	TMED5	Q9Y3A6	229 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	ASB3	Q9Y575	518 aa		11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIN3-231	ENST00000639895		A0A0J9YVX5	310 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	GSG1L2	A8MUP6	293 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	GOLGA8T	H3BQL2	631 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	TRIM49	P0CI25	452 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	TRIM49C	P0CI26	452 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	CCDC130	P13994	396 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	AMPD1	P23109	780 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	HIF1A	Q16665	826 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	OTOA	Q7RTW8	1153 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	RSPH3	Q86UC2	560 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	FBXL16	Q8N461	479 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	GSTCD	Q8NEC7	633 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	USP33	Q8TEY7	942 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZFYVE19	Q96K21	471 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	POP1	Q99575	1024 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	NINJ2	Q9NZG7	142 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	CAPN8	A6NHC0	703 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	MGEA5	O60502	916 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	EDF1	O60869	148 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	NELFE	P18615	380 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	VCP	P55072	806 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	DYNLL1	P63167	89 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	MAPK11	Q15759	364 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	TPH2	Q8IWU9	490 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	PPP1R36	Q96LQ0	422 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZSWIM1	Q9BR11	485 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	DDX56	Q9NY93	547 aa	Known RBP	11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	SOX13	Q9UN79	622 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZBTB1	Q9Y2K1	713 aa		11.9	□□□□□ -0.5
SPIN3-231	ENST00000639895	CAPN1	P07384	714 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	LDHC	P07864	332 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	CDK16	Q00536	496 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	CERKL	Q49MI3	558 aa	Predicted RBP	11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	WDR44	Q5JSH3	913 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	OR52E8	Q6IFG1	317 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	C3orf62	Q6ZUJ4	267 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	DPH6	Q7L8W6	267 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	DEFB107A	Q8IZN7	70 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	KIAA0895	Q8NCT3	520 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	ALKBH8	Q96BT7	664 aa	Known RBP	11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	PWWP2A	Q96N64	755 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	BRIP1	Q9BX63	1249 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	PCIF1	Q9H4Z3	704 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	OCEL1	Q9H607	264 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	TRPC7	Q9HCX4	862 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	NR2E1	Q9Y466	385 aa		11.9	□□□□□ -0.51
SPIN3-231	ENST00000639895	C2CD2L	O14523	706 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	MAP3K13	O43283	966 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CNOT3	O75175	753 aa	Known RBP	11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	DGKI	O75912	1065 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CCNB1	P14635	433 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	STX3	Q13277	289 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	RASA3	Q14644	834 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CHI3L2	Q15782	390 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	EGFLAM	Q63HQ2	1017 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	POTEA	Q6S8J7	498 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	DGKH	Q86XP1	1220 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	SIX6OS1	Q8N1H7	587 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	TTC16	Q8NEE8	873 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	TCP10L	Q8TDR4	215 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	HPS1	Q92902	700 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	SEPT3	Q9UH03	358 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CFAP99	D6REC4	459 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	KPNA4	O00629	521 aa	Predicted RBP	11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	SAT1	P21673	171 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	HOXD12	P35452	270 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	SLC25A3	Q00325	362 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	NR1D2	Q14995	579 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	ULK2	Q8IYT8	1036 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	SCAI	Q8N9R8	606 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	E2F7	Q96AV8	911 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CMTM5	Q96DZ9	223 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CLEC11A	Q9Y240	323 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	FIS1	Q9Y3D6	152 aa		11.89	□□□□□ -0.51
SPIN3-231	ENST00000639895	CACNA1F	O60840	1977 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms