RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 TRIM43BA6NCK2 446 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 NPEPPSL1A6NEC2 478 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 ITGA10O75578 1167 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 AGR2O95994 175 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 AHSGP02765 367 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 HMGCRP04035 888 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 CYP1A1P04798 512 aaPredicted RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 PDIA3P30101 505 aaKnown RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 ARL4CP56559 192 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 RPS16P62249 146 aaKnown RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 MXRA7P84157 204 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 DUSP2Q05923 314 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 SLC13A2Q13183 592 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 MTM1Q13496 603 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 CLEC14AQ86T13 490 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 CACNA2D3Q8IZS8 1091 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 CELF5Q8N6W0 485 aaKnown RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 PLA2G15Q8NCC3 412 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 GIMAP8Q8ND71 665 aaPredicted RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 SKA1Q96BD8 255 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 TRIM43Q96BQ3 446 aaPredicted RBP7.53□□□□□ -1.2
RFC1-217ENST00000639695 TMEM120AQ9BXJ8 343 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 ZNF518BQ9C0D4 1074 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 TM7SF3Q9NS93 570 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 RRN3Q9NYV6 651 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 SLC39A10Q9ULF5 831 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 MED16Q9Y2X0 877 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 SCINQ9Y6U3 715 aa7.53□□□□□ -1.2
RFC1-217ENST00000639695 CYR61O00622 381 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 IRAK2O43187 625 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 CD1AP06126 327 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 SRGNP10124 158 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 HDCP19113 662 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 KIR2DL3P43628 341 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 FLT3LGP49771 235 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 RAB32Q13637 225 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 TAF12Q16514 161 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 MZT2AQ6P582 158 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 TRMT10BQ6PF06 316 aaKnown RBP7.52□□□□□ -1.21
RFC1-217ENST00000639695 FBXO38Q6PIJ6 1188 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 CYP26C1Q6V0L0 522 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 CATSPERGQ6ZRH7 1159 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 TRMT2AQ8IZ69 625 aaKnown RBP7.52□□□□□ -1.21
RFC1-217ENST00000639695 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 NAXEQ8NCW5 288 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 CCDC150Q8NCX0 1101 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 IL17REQ8NFR9 667 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 OR10H5Q8NGA6 315 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 LPPQ93052 612 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 HEPHQ9BQS7 1158 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 DACT1Q9NYF0 836 aa7.52□□□□□ -1.21
RFC1-217ENST00000639695 AREL1O15033 823 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 CNOT4O95628 575 aaKnown RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 MT-ND5P03915 603 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 MTHFD1P11586 935 aaKnown RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 ETV4P43268 484 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 EPHB4P54760 987 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 GEMIN4P57678 1058 aaKnown RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 HTRA4P83105 476 aaPredicted RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 KLF10Q13118 480 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 SP140Q13342 867 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 SURF1Q15526 300 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 CIR1Q86X95 450 aaPredicted RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 KBTBD2Q8IY47 623 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 EIF2AK1Q9BQI3 630 aaKnown RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 C1orf43Q9BWL3 253 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 DPH1Q9BZG8 443 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 TMEM168Q9H0V1 697 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 C11orf54Q9H0W9 315 aaPredicted RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 PCED1AQ9H1Q7 454 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 MAGEH1Q9H213 219 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 L2HGDHQ9H9P8 463 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 OBP2BQ9NPH6 170 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 SLAMF7Q9NQ25 335 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 ING3Q9NXR8 418 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 ING1Q9UK53 422 aaPredicted RBP7.51□□□□□ -1.21
RFC1-217ENST00000639695 FAM184BQ9ULE4 1060 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 MAN2B2Q9Y2E5 1009 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 ACTL7AQ9Y615 435 aa7.51□□□□□ -1.21
RFC1-217ENST00000639695 NRP1O14786 923 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 MYL4P12829 197 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 PCSK1P29120 753 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 ITGA8P53708 1063 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 PPP2CBP62714 309 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 PPP2CAP67775 309 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 NOMO3P69849 1222 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 FOXO1Q12778 655 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 TOP3AQ13472 1001 aaPredicted RBP7.5□□□□□ -1.21
RFC1-217ENST00000639695 SIM2Q14190 667 aaPredicted RBP7.5□□□□□ -1.21
RFC1-217ENST00000639695 PABPC1LQ4VXU2 614 aaKnown RBP7.5□□□□□ -1.21
RFC1-217ENST00000639695 SPDYAQ5MJ70 313 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 LMBRD2Q68DH5 695 aaPredicted RBP7.5□□□□□ -1.21
RFC1-217ENST00000639695 TRIM68Q6AZZ1 485 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 MAATS1Q7Z4T9 603 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 PLEKHH3Q7Z736 793 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 GALNT15Q8N3T1 639 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 AOPEPQ8N6M6 819 aa7.5□□□□□ -1.21
RFC1-217ENST00000639695 REPS2Q8NFH8 660 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms