RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CCSER1Q9C0I3 900 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 FBXO4Q9UKT5 387 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 GPR179Q6PRD1 2367 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 NCANO14594 1321 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 MTMR11A4FU01 709 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 SPTLC1O15269 473 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 NCAM2O15394 837 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 ODC1P11926 461 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 PSMC3P17980 439 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 GDI1P31150 447 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 ABCD1P33897 745 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 DDIT3P35638 169 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 RPS9P46781 194 aaKnown RBP18.28■□□□□ 0.52
SMN2-216ENST00000638794 ACOT2P49753 483 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 PLD1Q13393 1074 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 FZD5Q13467 585 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 MYBPC2Q14324 1141 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 TMEM132DQ14C87 1099 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 ZNF528Q3MIS6 628 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 CENPPQ6IPU0 288 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 USP49Q70CQ1 688 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 TMC8Q8IU68 726 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 IRF7Q92985 503 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 TMEM209Q96SK2 561 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 SLITRK6Q9H5Y7 841 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 ZNF334Q9HCZ1 680 aaPredicted RBP18.28■□□□□ 0.52
SMN2-216ENST00000638794 MRPS17Q9Y2R5 130 aaKnown RBP18.28■□□□□ 0.52
SMN2-216ENST00000638794 CLIC4Q9Y696 253 aa18.28■□□□□ 0.52
SMN2-216ENST00000638794 A0A1W2PRU2 124 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 PIRO00625 290 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 KINO60870 393 aaKnown RBP18.27■□□□□ 0.52
SMN2-216ENST00000638794 ALDH1A3P47895 512 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 ID4P47928 161 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 EPHB3P54753 998 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 CSTF1Q05048 431 aaKnown RBP18.27■□□□□ 0.52
SMN2-216ENST00000638794 CUL4AQ13619 759 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 ADALQ6DHV7 355 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 TTC9BQ8N6N2 239 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
SMN2-216ENST00000638794 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 DEPDC1BQ8WUY9 529 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 IKZF4Q9H2S9 585 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 ST6GALNAC4Q9H4F1 302 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 TRPV4Q9HBA0 871 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 NDRG2Q9UN36 371 aaKnown RBP18.27■□□□□ 0.52
SMN2-216ENST00000638794 SLC27A5Q9Y2P5 690 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 DERAQ9Y315 318 aa18.27■□□□□ 0.52
SMN2-216ENST00000638794 NUP210Q8TEM1 1887 aaPredicted RBP18.26■□□□□ 0.51
SMN2-216ENST00000638794 ANO9A1A5B4 782 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 PTPAQ15257 358 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 ARMCX5Q6P1M9 558 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 SFR1Q86XK3 245 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 MFSD6LQ8IWD5 586 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 ZNF687Q8N1G0 1237 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 SUMF1Q8NBK3 374 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 OR10T2Q8NGX3 314 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 RSPRY1Q96DX4 576 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 HINFPQ9BQA5 517 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 GPR88Q9GZN0 384 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 ASB7Q9H672 318 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 TRPV5Q9NQA5 729 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 FBXO2Q9UK22 296 aaPredicted RBP18.26■□□□□ 0.51
SMN2-216ENST00000638794 AGO2Q9UKV8 859 aaKnown RBP18.26■□□□□ 0.51
SMN2-216ENST00000638794 C2CD2Q9Y426 696 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 STYXL1Q9Y6J8 313 aa18.26■□□□□ 0.51
SMN2-216ENST00000638794 CACNA1AO00555 2505 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 HEPACAM2A8MVW5 462 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 MAN2B1O00754 1011 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 SOAT2O75908 522 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 CYP11A1P05108 521 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 PAX3P23760 479 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 MTAPQ13126 283 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 SLFN12LQ6IEE8 588 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 TSSK4Q6SA08 328 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 KIAA2013Q8IYS2 634 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 RUBCNQ92622 972 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 STK17AQ9UEE5 414 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 CCDC39Q9UFE4 941 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 PCDHGA2Q9Y5H1 932 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 PIAS3Q9Y6X2 628 aa18.25■□□□□ 0.51
SMN2-216ENST00000638794 CEP250Q9BV73 2442 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 ARNTLO00327 626 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 ZNF263O14978 683 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 PPP1R37O75864 691 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 PDCP20941 246 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 ADSSP30520 456 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 CDR1P51861 262 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 FOXK2Q01167 660 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 SLC39A12Q504Y0 691 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
SMN2-216ENST00000638794 GAREM2Q75VX8 874 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 DNAJB7Q7Z6W7 309 aaPredicted RBP18.24■□□□□ 0.51
SMN2-216ENST00000638794 DCLK2Q8N568 766 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 ZBTB44Q8NCP5 570 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms