RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	BTBD6	Q96KE9	485 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	TTC1	Q99614	292 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	RUSC1	Q9BVN2	902 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	MANSC1	Q9H8J5	431 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	USP29	Q9HBJ7	922 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	PCDH18	Q9HCL0	1135 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	POLI	Q9UNA4	740 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	NFASC	O94856	1347 aa		11.7	□□□□□ -0.54
STRADA-231	ENST00000638708	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708		A0A1W2PPM1	405 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708		B2RBV5	119 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	TBCA	O75347	108 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	IDO1	P14902	403 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CPA3	P15088	417 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	GAP43	P17677	238 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	YY1	P25490	414 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CD97	P48960	835 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CLCN2	P51788	898 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	TBL3	Q12788	808 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	MPP3	Q13368	585 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	MSLN	Q13421	630 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	DCTN2	Q13561	401 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SEPT7	Q16181	437 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	UBE2S	Q16763	222 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CCDC142	Q17RM4	750 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ANKRD20A4	Q4UJ75	823 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	EFHC2	Q5JST6	749 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	MAP3K21	Q5TCX8	1036 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CHSY1	Q86X52	802 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	MAP7D3	Q8IWC1	876 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SLC44A5	Q8NCS7	719 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	RSPH1	Q8WYR4	309 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	DNAJC1	Q96KC8	554 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	PCDHB18P	Q96TA0	734 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CYTH2	Q99418	400 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	OLFML3	Q9NRN5	406 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	TUBGCP4	Q9UGJ1	667 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	UBE4B	O95155	1302 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708		F5H6K3	240 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708		H3BRJ5	948 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	NDC80	O14777	642 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	DLD	P09622	509 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CDK4	P11802	303 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	KLRC2	P26717	231 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	PRDX5	P30044	214 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ADSS	P30520	456 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	GTF2H1	P32780	548 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	RPL5	P46777	297 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SERPINB8	P50452	374 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	EMP3	P54852	163 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	PDK3	Q15120	406 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ADRM1	Q16186	407 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	USH1G	Q495M9	461 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SFT2D3	Q587I9	215 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	C1orf146	Q5VVC0	180 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	UGT2A3	Q6UWM9	527 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	RFX8	Q6ZV50	586 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	TTC7B	Q86TV6	843 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	RBM15B	Q8NDT2	890 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	LMO3	Q8TAP4	145 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CERK	Q8TCT0	537 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	GAB3	Q8WWW8	586 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ABTB1	Q969K4	478 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ALKBH8	Q96BT7	664 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	MTBP	Q96DY7	904 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SETDB2	Q96T68	719 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	ZNF287	Q9HBT7	754 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	S100A14	Q9HCY8	104 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	FETUB	Q9UGM5	382 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	SLC7A8	Q9UHI5	535 aa		11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.69	□□□□□ -0.54
STRADA-231	ENST00000638708	CAPN14	A8MX76	684 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	BIRC5	O15392	142 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	CAMTA2	O94983	1202 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	OAT	P04181	439 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	VIL1	P09327	827 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	TRIM49	P0CI25	452 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	TRIM49C	P0CI26	452 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	KRT4	P19013	534 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	ARL4C	P56559	192 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	PLOD1	Q02809	727 aa	Predicted RBP	11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	CCNG2	Q16589	344 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	CLEC16A	Q2KHT3	1053 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	PARP10	Q53GL7	1025 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	C1orf228	Q6PIY5	440 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	RBM44	Q6ZP01	1051 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	NEDD1	Q8NHV4	660 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	ERMN	Q8TAM6	284 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	BTBD9	Q96Q07	612 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	HERPUD2	Q9BSE4	406 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	KLHL4	Q9C0H6	718 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	RBM38	Q9H0Z9	239 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	PLK2	Q9NYY3	685 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	NOCT	Q9UK39	431 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	DNM3	Q9UQ16	869 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	DMTF1	Q9Y222	760 aa		11.68	□□□□□ -0.54
STRADA-231	ENST00000638708	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms