RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
LINC02001-202ENST00000638682 TRIM6Q9C030 488 aaPredicted RBP11.99□□□□□ -0.49
LINC02001-202ENST00000638682 APOBEC3GQ9HC16 384 aaKnown RBP11.99□□□□□ -0.49
LINC02001-202ENST00000638682 GUCA1BQ9UMX6 200 aa11.99□□□□□ -0.49
LINC02001-202ENST00000638682 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
LINC02001-202ENST00000638682 PAXBP1Q9Y5B6 917 aa11.99□□□□□ -0.49
LINC02001-202ENST00000638682 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
LINC02001-202ENST00000638682 SCN1AP35498 2009 aa11.99□□□□□ -0.49
LINC02001-202ENST00000638682 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.498e-7■■■□□ 14.7
LINC02001-202ENST00000638682 CYP26A1O43174 497 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 ASS1P00966 412 aaKnown RBP11.98□□□□□ -0.49
LINC02001-202ENST00000638682 CTSHP09668 335 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 ACRP10323 421 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 TNFAIP3P21580 790 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 TBXAS1P24557 533 aaPredicted RBP11.98□□□□□ -0.49
LINC02001-202ENST00000638682 CASQ1P31415 396 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 MYL6P60660 151 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 MGAT3Q09327 533 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 CUL2Q13617 745 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 TMEM132DQ14C87 1099 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 SHHQ15465 462 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 SGSM1Q2NKQ1 1148 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 C10orf76Q5T2E6 689 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 LRRC8DQ7L1W4 858 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 LNX1Q8TBB1 728 aaPredicted RBP11.98□□□□□ -0.49
LINC02001-202ENST00000638682 SLC20A1Q8WUM9 679 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 WDR24Q96S15 920 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 ARID3AQ99856 593 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 AGPAT1Q99943 283 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 SYT11Q9BT88 431 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 MYO1AQ9UBC5 1043 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 NAGPAQ9UK23 515 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
LINC02001-202ENST00000638682 CHRNA1P02708 482 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 RFC2P35250 354 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 THPOP40225 353 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 YARSP54577 528 aaKnown RBP11.97□□□□□ -0.49
LINC02001-202ENST00000638682 NAB2Q15742 525 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 UBXN11Q5T124 520 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 ALKBH5Q6P6C2 394 aaKnown RBP11.97□□□□□ -0.49
LINC02001-202ENST00000638682 DEFB128Q7Z7B8 93 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 GLYCTKQ8IVS8 523 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 CD302Q8IX05 232 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 SLC35F6Q8N357 371 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 SLC30A5Q8TAD4 765 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 OLIG1Q8TAK6 271 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 SNX27Q96L92 541 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■■■■ 30.2
LINC02001-202ENST00000638682 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
LINC02001-202ENST00000638682 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
LINC02001-202ENST00000638682 PLEKHA5Q9HAU0 1116 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
LINC02001-202ENST00000638682 DUSP10Q9Y6W6 482 aa11.97□□□□□ -0.49
LINC02001-202ENST00000638682 MACROD2A1Z1Q3 448 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 FANCGO15287 622 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 RPS6KA5O75582 802 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 RECQL4O94761 1208 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 PFKMP08237 780 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 KRT19P08727 400 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 CKBP12277 381 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 SELPP16109 830 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
LINC02001-202ENST00000638682 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.49
LINC02001-202ENST00000638682 SLC47A2Q86VL8 602 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 NT5DC4Q86YG4 428 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
LINC02001-202ENST00000638682 EPS8L1Q8TE68 723 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 TAF4BQ92750 862 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 SECISBP2LQ93073 1101 aaKnown RBP11.96□□□□□ -0.49
LINC02001-202ENST00000638682 PACSIN1Q9BY11 444 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 NIF3L1Q9GZT8 377 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 SEPT11Q9NVA2 429 aaKnown RBP11.96□□□□□ -0.49
LINC02001-202ENST00000638682 SIX4Q9UIU6 781 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 DERAQ9Y315 318 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 C2CD2Q9Y426 696 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 HES2Q9Y543 173 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.49
LINC02001-202ENST00000638682 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 ITGB3P05106 788 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 CYP11B1P15538 503 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 CHRNB2P17787 502 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 PDE6CP51160 858 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 GUCY2FP51841 1108 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.5
LINC02001-202ENST00000638682 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 TMEM240Q5SV17 173 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 TAF3Q5VWG9 929 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.5
LINC02001-202ENST00000638682 ZNF365Q70YC5 407 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 XYLT2Q9H1B5 865 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 ACP6Q9NPH0 428 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 DPP3Q9NY33 737 aa11.96□□□□□ -0.5
LINC02001-202ENST00000638682 ST3GAL5Q9UNP4 418 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms