RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 GPR149Q86SP6 731 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 RIPOR3Q96MK2 946 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 PHF7Q9BWX1 381 aaPredicted RBP13.49□□□□□ -0.25
CLN6-225ENST00000638144 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 HOOK1Q9UJC3 728 aaKnown RBP13.49□□□□□ -0.25
CLN6-225ENST00000638144 POLIQ9UNA4 740 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 DOCK8Q8NF50 2099 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 NOTCH4Q99466 2003 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 C2CD4DB7Z1M9 353 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 PRRG1O14668 218 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 CLSTN1O94985 981 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 OAZ2O95190 189 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 KIF20AO95235 890 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 VNN2O95498 520 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 TRIM49P0CI25 452 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 TRIM49CP0CI26 452 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
CLN6-225ENST00000638144 TYMPP19971 482 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 BMP6P22004 513 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 MTHFRP42898 656 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
CLN6-225ENST00000638144 RBP5P82980 135 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 ADCY1Q08828 1119 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 SURF1Q15526 300 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 RNF19BQ6ZMZ0 732 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 OSTM1Q86WC4 334 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 TTC9BQ8N6N2 239 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 RTP3Q9BQQ7 232 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 PIDD1Q9HB75 910 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 CYP4F11Q9HBI6 524 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 HCFC1R1Q9NWW0 138 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 PRKAG3Q9UGI9 489 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 L1RE1Q9UN81 338 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 TRAF3IP3Q9Y228 551 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
CLN6-225ENST00000638144 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 AKAP3O75969 853 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 ABLIM3O94929 683 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
CLN6-225ENST00000638144 PNPLA4P41247 253 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 BIRC3Q13489 604 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 C1orf220Q5T0J3 134 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
CLN6-225ENST00000638144 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 PDCL2Q8N4E4 241 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 ST13P5Q8NFI4 369 aaPredicted RBP13.47□□□□□ -0.25
CLN6-225ENST00000638144 CMASQ8NFW8 434 aaPredicted RBP13.47□□□□□ -0.25
CLN6-225ENST00000638144 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 NECTIN4Q96NY8 510 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 CRISPLD1Q9H336 500 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 MMRN2Q9H8L6 949 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■■■■■ 90.8
CLN6-225ENST00000638144 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
CLN6-225ENST00000638144 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
CLN6-225ENST00000638144 CLUHO75153 1309 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 HUS1O60921 280 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 N4BP1O75113 896 aaKnown RBP13.46□□□□□ -0.25
CLN6-225ENST00000638144 PHACTR2O75167 634 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 SOAT2O75908 522 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
CLN6-225ENST00000638144 CYP11A1P05108 521 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 MYL6P60660 151 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 ADAM9Q13443 819 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 SLC39A12Q504Y0 691 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 C15orf39Q6ZRI6 1047 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 GET4Q7L5D6 327 aaPredicted RBP13.46□□□□□ -0.25
CLN6-225ENST00000638144 GRASPQ7Z6J2 395 aaPredicted RBP13.46□□□□□ -0.25
CLN6-225ENST00000638144 METTL23Q86XA0 190 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 ATAD1Q8NBU5 361 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 HDAC7Q8WUI4 952 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 DPP7Q9UHL4 492 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 CTNND2Q9UQB3 1225 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 FRMD4BQ9Y2L6 1034 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 INSL5Q9Y5Q6 135 aa13.46□□□□□ -0.25
CLN6-225ENST00000638144 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
CLN6-225ENST00000638144 OR6C75A6NL08 312 aa13.45□□□□□ -0.26
CLN6-225ENST00000638144 VNN1O95497 513 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms