RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	PDZD7	Q9H5P4	517 aa		10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	MRPL44	Q9H9J2	332 aa	Known RBP	10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PARD6A	Q9NPB6	346 aa		10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	RAB23	Q9ULC3	237 aa		10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	EXOC7	Q9UPT5	735 aa		10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CDY1	Q9Y6F8	540 aa		10.3	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CEP250	Q9BV73	2442 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SHISA7	A6NL88	538 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981		K7ENM7	598 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SLC16A4	O15374	487 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	B3GAT3	O94766	335 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CEBPB	P17676	345 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	NRL	P54845	237 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	NCKAP1L	P55160	1127 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SPEM2	Q0P670	501 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	DPYD	Q12882	1025 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PRPF4B	Q13523	1007 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CUL4B	Q13620	913 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GRM2	Q14416	872 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	KCNB1	Q14721	858 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PPP2R5D	Q14738	602 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	LPAL2	Q16609	132 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	FAM187B	Q17R55	369 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	HAUS6	Q7Z4H7	955 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SFR1	Q86XK3	245 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	BSND	Q8WZ55	320 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	DNASE1L2	Q92874	299 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SMARCE1	Q969G3	411 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	SYAP1	Q96A49	352 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ELSPBP1	Q96BH3	223 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ADPGK	Q9BRR6	497 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	BLZF1	Q9H2G9	400 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	FZD8	Q9H461	694 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ST6GALNAC4	Q9H4F1	302 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	POLD4	Q9HCU8	107 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ARHGAP28	Q9P2N2	729 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GDA	Q9Y2T3	454 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	NCOR2	Q9Y618	2525 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PDCD11	Q14690	1871 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GPR179	Q6PRD1	2367 aa		10.29	□□□□□ -0.76
CACNA1A-256	ENST00000637981	TMEM189-UBE2V1	I3L0A0	370 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ACKR2	O00590	384 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	MAN2B1	O00754	1011 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	EIF3D	O15371	548 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GCNT3	O95395	438 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	LRG1	P02750	347 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	RPN1	P04843	607 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	EDN1	P05305	212 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PRKCB	P05771	671 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ADRB1	P08588	477 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	TDGF1	P13385	188 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	PTPN2	P17706	415 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	IGFBP6	P24592	240 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	TKT	P29401	623 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CLCNKB	P51801	687 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GTF2B	Q00403	316 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ST3GAL2	Q16842	350 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GLRA4	Q5JXX5	417 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	FAM26F	Q5R3K3	315 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	LAIR1	Q6GTX8	287 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ANKS3	Q6ZW76	656 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ZNF720	Q7Z2F6	126 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	GRAMD1C	Q8IYS0	662 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CELF5	Q8N6W0	485 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	TMEM161B	Q8NDZ6	487 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	DDX27	Q96GQ7	796 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CORO1B	Q9BR76	489 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	MRPL4	Q9BYD3	311 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	NUP62CL	Q9H1M0	184 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CHRD	Q9H2X0	955 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	TMEM206	Q9H813	350 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	BRD9	Q9H8M2	597 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	ZFP14	Q9HCL3	533 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	AVEN	Q9NQS1	362 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	USP20	Q9Y2K6	914 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	BACE2	Q9Y5Z0	518 aa		10.28	□□□□□ -0.76
CACNA1A-256	ENST00000637981	CACNA1B	Q00975	2339 aa		10.27	□□□□□ -0.76
CACNA1A-256	ENST00000637981	UBE4B	O95155	1302 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	ARHGEF37	A1IGU5	675 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981		I3L4J1	428 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PRRG1	O14668	218 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	TRAPPC3	O43617	180 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	RHOBTB3	O94955	611 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	FCAR	P24071	287 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	ELF1	P32519	619 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PPP1R2	P41236	205 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	CCR3	P51677	355 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	ROR1	Q01973	937 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PNOC	Q13519	176 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	UPP1	Q16831	310 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	KMT5B	Q4FZB7	885 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PPM1J	Q5JR12	505 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	FAM78A	Q5JUQ0	283 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PRSS36	Q5K4E3	855 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	EEF1DP3	Q658K8	133 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	MAMSTR	Q6ZN01	415 aa		10.27	□□□□□ -0.77
CACNA1A-256	ENST00000637981	PRR23B	Q6ZRT6	265 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms