RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SLFN11Q7Z7L1 901 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 FBXO25Q8TCJ0 367 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 WHAMMQ8TF30 809 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 NEUROG2Q9H2A3 272 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 VTA1Q9NP79 307 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 COX16Q9P0S2 106 aa10.28□□□□□ -0.76
CACNA1A-248ENST00000637774 ATAD5Q96QE3 1844 aa10.27□□□□□ -0.76
CACNA1A-248ENST00000637774 CNTNAP2Q9UHC6 1331 aa10.27□□□□□ -0.76
CACNA1A-248ENST00000637774 ASAP2O43150 1006 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 C22orf31O95567 290 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 SYF2O95926 243 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 TWF2Q6IBS0 349 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 TAPT1Q6NXT6 567 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 TRIM11Q96F44 468 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 PTPN18Q99952 460 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 SELENOSQ9BQE4 189 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 SYT11Q9BT88 431 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 CALN1Q9BXU9 219 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 SLITRK6Q9H5Y7 841 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 ZBTB42B2RXF5 422 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 F8VP50 259 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 ACSL3O95573 720 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 P4HA1P13674 534 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 GNGT1P63211 74 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 ATP11AP98196 1134 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 MBTD1Q05BQ5 628 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 PDCLQ13371 301 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 CUL1Q13616 776 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 MOGSQ13724 837 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 B4GALNT4Q76KP1 1039 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 DDX1Q92499 740 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 HSPH1Q92598 858 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 MIS12Q9H081 205 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 FAM114A2Q9NRY5 505 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 PARVAQ9NVD7 372 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 CPSF3Q9UKF6 684 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 MCM3APO60318 1980 aa10.27□□□□□ -0.77
CACNA1A-248ENST00000637774 YWHAEP62258 255 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 NOMO3P69849 1222 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 ZSCAN26Q16670 478 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 SYCP2LQ5T4T6 812 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 TLK2Q86UE8 772 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PRELID2Q8N945 189 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 ERP44Q9BS26 406 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 GCOM2Q9BZD3 368 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 GDF3Q9NR23 364 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 CHST7Q9NS84 486 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 RGPD3A6NKT7 1758 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 RGPD4Q7Z3J3 1758 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 MAP3K6O95382 1288 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 GAS8O95995 478 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 KRT3P12035 628 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 TAS2R40P59535 323 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 MCL1Q07820 350 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 FAM102AQ5T9C2 384 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 C11orf63Q6NUN7 778 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 DENND1BQ6P3S1 775 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 RHOT1Q8IXI2 618 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 C12orf29Q8N999 325 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 C1orf127Q8N9H9 656 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 FEZF2Q8TBJ5 459 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 NGRNQ9NPE2 291 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PPANQ9NQ55 473 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 SCINQ9Y6U3 715 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PHF2O75151 1096 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 LGR5O75473 907 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 CYP1A2P05177 515 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 HOXC6P09630 235 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 HSD17B3P37058 310 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 KRT17Q04695 432 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 ZNF792Q3KQV3 632 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 DENND2CQ68D51 928 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 RPS6KC1Q96S38 1066 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 DPP3Q9NY33 737 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 HMGXB4Q9UGU5 601 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 PSME4Q14997 1843 aa10.26□□□□□ -0.77
CACNA1A-248ENST00000637774 COL11A1P12107 1806 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 DCAF8L1A6NGE4 600 aa10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 RARBP10826 455 aa10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 UNGP13051 313 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 ADORA2BP29275 332 aa10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 CHRNA3P32297 505 aa10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 AP3M2P53677 418 aa10.25□□□□□ -0.77
CACNA1A-248ENST00000637774 DUSP28Q4G0W2 176 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms