RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TFAMQ00059 246 aaKnown RBP20.49■□□□□ 0.87
CLN6-221ENST00000637494 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
CLN6-221ENST00000637494 CRELD2Q6UXH1 353 aaPredicted RBP20.49■□□□□ 0.87
CLN6-221ENST00000637494 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 ST13P5Q8NFI4 369 aaPredicted RBP20.49■□□□□ 0.87
CLN6-221ENST00000637494 SAAL1Q96ER3 474 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 PGLYRP2Q96PD5 576 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 IKZF4Q9H2S9 585 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 KBTBD4Q9NVX7 518 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 YIPF1Q9Y548 306 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 DOCK8Q8NF50 2099 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 MUC6Q6W4X9 2439 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 KRBA1A5PL33 1030 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 H0Y858 1186 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 CYB561D2O14569 222 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 EXTL3O43909 919 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
CLN6-221ENST00000637494 OR4Q2P0C623 313 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 NPR3P17342 541 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 E2F4Q16254 413 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 SLC5A9Q2M3M2 681 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 BRSK2Q8IWQ3 736 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 KXD1Q9BQD3 176 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 TRIM9Q9C026 710 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 TBC1D17Q9HA65 648 aa20.48■□□□□ 0.87
CLN6-221ENST00000637494 SPTLC1O15269 473 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 ECI2O75521 394 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 CYP11A1P05108 521 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 MYL4P12829 197 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 CEBPBP17676 345 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 GPC5P78333 572 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 PHLDB3Q6NSJ2 640 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 SHC4Q6S5L8 630 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 GPD1LQ8N335 351 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 RPP25Q9BUL9 199 aaKnown RBP20.47■□□□□ 0.87
CLN6-221ENST00000637494 PCIF1Q9H4Z3 704 aa20.47■□□□□ 0.87
CLN6-221ENST00000637494 GOLGA8IPA6NC78 632 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 GOLGA8JA6NMD2 632 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 KPNA7A9QM74 516 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 POLR2DO15514 142 aaKnown RBP20.46■□□□□ 0.87
CLN6-221ENST00000637494 TMEM191BP0C7N4 346 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 SMARCB1Q12824 385 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 DUSP4Q13115 394 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 SURF1Q15526 300 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 PRSS36Q5K4E3 855 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 EFCAB13Q8IY85 973 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 CBWD1Q9BRT8 395 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 GPR88Q9GZN0 384 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 ZFP14Q9HCL3 533 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 CEP72Q9P209 647 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 ASB3Q9Y575 518 aa20.46■□□□□ 0.87
CLN6-221ENST00000637494 MTMR11A4FU01 709 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 EIF3DO15371 548 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLN6-221ENST00000637494 PI15O43692 258 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 FGF19O95750 216 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 TUFMP49411 452 aaKnown RBP20.45■□□□□ 0.86
CLN6-221ENST00000637494 PRKCQQ04759 706 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 VEPH1Q14D04 833 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 FAM26FQ5R3K3 315 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 CENPPQ6IPU0 288 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 CNNM4Q6P4Q7 775 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 ITIH5Q86UX2 942 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 CCDC105Q8IYK2 499 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 CEP57L1Q8IYX8 460 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
CLN6-221ENST00000637494 HS6ST3Q8IZP7 471 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 C2orf15Q8WU43 125 aaKnown RBP20.45■□□□□ 0.86
CLN6-221ENST00000637494 ELSPBP1Q96BH3 223 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 TCEAL4Q96EI5 215 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 ANKRD36BP1Q96IX9 119 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 C7orf25Q9BPX7 421 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 FGFBP2Q9BYJ0 223 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 SLITRK6Q9H5Y7 841 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 KIAA1586Q9HCI6 787 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 ITGA11Q9UKX5 1188 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 PCDHA7Q9UN72 937 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 AGAP1Q9UPQ3 857 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 SIT1Q9Y3P8 196 aa20.45■□□□□ 0.86
CLN6-221ENST00000637494 ANK1P16157 1881 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 ZNF233A6NK53 670 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 HUS1O60921 280 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 ITGB3P05106 788 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 POLR2BP30876 1174 aaKnown RBP20.44■□□□□ 0.86
CLN6-221ENST00000637494 SLC39A12Q504Y0 691 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 CSGALNACT2Q8N6G5 542 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 DTWD2Q8NBA8 298 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 FAM200AQ8TCP9 573 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 FAM86C1Q9NVL1 165 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 SLC27A5Q9Y2P5 690 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 ZDBF2Q9HCK1 2354 aa20.44■□□□□ 0.86
CLN6-221ENST00000637494 DOCK6Q96HP0 2047 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 TNNC2P02585 160 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 KRT19P08727 400 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 EPHA5P54756 1037 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 RBP5P82980 135 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 TSPY1Q01534 308 aa20.43■□□□□ 0.86
CLN6-221ENST00000637494 DNM1Q05193 864 aaKnown RBP20.43■□□□□ 0.86
CLN6-221ENST00000637494 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
CLN6-221ENST00000637494 MLF2Q15773 248 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms