RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
SMARCA2-250ENST00000636367 TMX3Q96JJ7 454 aa8.43□□□□□ -1.06
SMARCA2-250ENST00000636367 COG8Q96MW5 612 aa8.43□□□□□ -1.06
SMARCA2-250ENST00000636367 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
SMARCA2-250ENST00000636367 CNNM1Q9NRU3 951 aa8.43□□□□□ -1.06
SMARCA2-250ENST00000636367 PHRF1Q9P1Y6 1649 aaKnown RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 FAM95CA0A1B0GW59 222 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 HNRNPDLO14979 420 aaKnown RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 RPLP2P05387 115 aaKnown RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 HDCP19113 662 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 ROM1Q03395 351 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 ERV3-1Q14264 604 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 UNC13DQ70J99 1090 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 CHD1LQ86WJ1 897 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 ZNF713Q8N859 430 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 OTUD7AQ8TE49 926 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 UBE2FQ969M7 185 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 RADILQ96JH8 1075 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 FCRL2Q96LA5 508 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 FOXB1Q99853 325 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 TRIM54Q9BYV2 358 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 TM7SF3Q9NS93 570 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 KRT84Q9NSB2 600 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 PIH1D1Q9NWS0 290 aaKnown RBP8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 NSMCE4AQ9NXX6 385 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 SIT1Q9Y3P8 196 aa8.42□□□□□ -1.06
SMARCA2-250ENST00000636367 MARF1Q9Y4F3 1742 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 NFIBO00712 420 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 FYB1O15117 783 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 DAPK3O43293 454 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 GCP02774 474 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 A1BGP04217 495 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 BMP3P12645 472 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 HOXB4P17483 251 aaPredicted RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 MALP21145 153 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 POLD1P28340 1107 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 POLD2P49005 469 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 NAP1L1P55209 391 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 SLC12A1Q13621 1099 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 USP49Q70CQ1 688 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 FAM129CQ86XR2 697 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 CDYL2Q8N8U2 506 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 CYP2W1Q8TAV3 490 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 NMD3Q96D46 503 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 ASB2Q96Q27 587 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 TREX2Q9BQ50 279 aaPredicted RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 ELAC1Q9H777 363 aaKnown RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 HAUS2Q9NVX0 235 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 BRD4O60885 1362 aaPredicted RBP8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
SMARCA2-250ENST00000636367 THAP12O43422 761 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 OIP5O43482 229 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 SGTAO43765 313 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 SLC3A2P08195 630 aaKnown RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 ITGA5P08648 1049 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 HNRNPA1P09651 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 RXRAP19793 462 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 ADSLP30566 484 aaPredicted RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 CLNS1AP54105 237 aaKnown RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 HERVK_113P62684 666 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 EXOSC9Q06265 439 aaKnown RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 KIAA1614Q5VZ46 1190 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 LRSAM1Q6UWE0 723 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 CATSPERGQ6ZRH7 1159 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.4□□□□□ -1.064e-6■■■■□ 24.4
SMARCA2-250ENST00000636367 BRIX1Q8TDN6 353 aaKnown RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 CSGALNACT1Q8TDX6 532 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 RSPH1Q8WYR4 309 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 ST8SIA4Q92187 359 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 HOXB13Q92826 284 aaPredicted RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 SUCLG2Q96I99 432 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 FAM46AQ96IP4 442 aaKnown RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 FAM167AQ96KS9 214 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 HSPA12BQ96MM6 686 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 CWC25Q9NXE8 425 aaPredicted RBP8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 KIF20BQ96Q89 1820 aa8.4□□□□□ -1.06
SMARCA2-250ENST00000636367 TRIM43BA6NCK2 446 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 GFRA3O60609 400 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 FAM155BO75949 473 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 IL1R1P14778 569 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 ALOX15P16050 662 aaPredicted RBP8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 UBE3AQ05086 875 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 MGAT5Q09328 741 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 FLYWCH1Q4VC44 716 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 KLHL17Q6TDP4 642 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 RNF44Q7L0R7 432 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 SHISA5Q8N114 240 aa8.4□□□□□ -1.07
SMARCA2-250ENST00000636367 CCHCR1Q8TD31 782 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms