RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	DYDC2	Q96IM9	177 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	VPS50	Q96JG6	964 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	FNBP1	Q96RU3	617 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	CGREF1	Q99674	301 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	WDR11	Q9BZH6	1224 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	GPAM	Q9HCL2	828 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	TUFT1	Q9NNX1	390 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	MYOZ2	Q9NPC6	264 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	EMILIN3	Q9NT22	766 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	PLK2	Q9NYY3	685 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	ZNHIT2	Q9UHR6	403 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306	ADGRA3	Q8IWK6	1321 aa		11.37	□□□□□ -0.59
CHD2-223	ENST00000636306		A0A087X0T9	212 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	POTEB3	A0JP26	581 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	POTEC	B2RU33	542 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	PHF2	O75151	1096 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	PDE5A	O76074	875 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	FAM228B	P0C875	321 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	FDX1	P10109	184 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	GAP43	P17677	238 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	PTGIR	P43119	386 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	RAP1GDS1	P52306	607 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	CXCL9	Q07325	125 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	KLHL30	Q0D2K2	578 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ASPH	Q12797	758 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	MAPK7	Q13164	816 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SYCP2L	Q5T4T6	812 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	POTEB	Q6S5H4	581 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	CYFIP1	Q7L576	1253 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	MCF2L2	Q86YR7	1114 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SCAI	Q8N9R8	606 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	FBXO25	Q8TCJ0	367 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	C10orf82	Q8WW14	230 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	NMD3	Q96D46	503 aa	Known RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	DNAJC19	Q96DA6	116 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	TRIM31	Q9BZY9	425 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	TBC1D7	Q9P0N9	293 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ZFP69B	Q9UJL9	534 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	AMFR	Q9UKV5	643 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ARHGAP10	A1A4S6	786 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	OPHN1	O60890	802 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	TBCA	O75347	108 aa	Known RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SERPINB7	O75635	380 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	KRT38	O76015	456 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SLURP2	P0DP57	97 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ALAS1	P13196	640 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	S100A1	P23297	94 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	CHRNA3	P32297	505 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	FOXN2	P32314	431 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	GTF2H1	P32780	548 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ECE1	P42892	770 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SLCO1A2	P46721	670 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	RPL5	P46777	297 aa	Known RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	GALK1	P51570	392 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	NEK3	P51956	506 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ZNF280A	P59817	542 aa	Predicted RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	EDRF1	Q3B7T1	1238 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	DCAF15	Q66K64	600 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ZNF449	Q6P9G9	518 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	BORA	Q6PGQ7	559 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	C1orf228	Q6PIY5	440 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	IZUMO2	Q6UXV1	221 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	DSTYK	Q6XUX3	929 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	STXBP4	Q6ZWJ1	553 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	PATL1	Q86TB9	770 aa	Known RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	RSPH3	Q86UC2	560 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	NT5DC3	Q86UY8	548 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ANKRD35	Q8N283	1001 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	GDAP1	Q8TB36	358 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	NSL1	Q96IY1	281 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	MIPEP	Q99797	713 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	TMEM39B	Q9GZU3	492 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	DEFB129	Q9H1M3	183 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SEMA6B	Q9H3T3	888 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ARHGEF38	Q9NXL2	777 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	MAP3K20	Q9NYL2	800 aa	Known RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	HESX1	Q9UBX0	185 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	ZNF180	Q9UJW8	692 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	SNX24	Q9Y343	169 aa		11.36	□□□□□ -0.59
CHD2-223	ENST00000636306	UBE4B	O95155	1302 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	IPO5	O00410	1097 aa	Known RBP	11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	WNT10B	O00744	389 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	VILL	O15195	856 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	EXOC3	O60645	756 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	MAGEC1	O60732	1142 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	EDF1	O60869	148 aa	Known RBP	11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	GGPS1	O95749	300 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	CFB	P00751	764 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	ANPEP	P15144	967 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	FUT4	P22083	530 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	JAG1	P78504	1218 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	SPIRE1	Q08AE8	756 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	NR1H3	Q13133	447 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	RRP1B	Q14684	758 aa	Known RBP	11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	KRT72	Q14CN4	511 aa		11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.35	□□□□□ -0.59
CHD2-223	ENST00000636306	MAP3K21	Q5TCX8	1036 aa		11.35	□□□□□ -0.59

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