RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PRAMEF12O95522 483 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 EGFP01133 1207 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 WEE1P30291 646 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 EPHB3P54753 998 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 PLD1Q13393 1074 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 GPR158Q5T848 1215 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 NT5DC1Q5TFE4 455 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 PMS2CLQ68D20 193 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 APPL2Q8NEU8 664 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 NUP210Q8TEM1 1887 aaPredicted RBP19.89■□□□□ 0.77
CLN6-212ENST00000636020 DDX12PQ92771 950 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 JAKMIP1Q96N16 626 aaKnown RBP19.89■□□□□ 0.77
CLN6-212ENST00000636020 ZMAT2Q96NC0 199 aaKnown RBP19.89■□□□□ 0.77
CLN6-212ENST00000636020 CRISPLD1Q9H336 500 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 GKN1Q9NS71 199 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 THG1LQ9NWX6 298 aaKnown RBP19.89■□□□□ 0.77
CLN6-212ENST00000636020 KCNJ14Q9UNX9 436 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 APBB3O95704 486 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 GBP1P32455 592 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 RPL9P32969 192 aaKnown RBP19.88■□□□□ 0.77
CLN6-212ENST00000636020 MCM2P49736 904 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 BLOC1S2Q6QNY1 142 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 CEP120Q8N960 986 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 KCNB2Q92953 911 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 FAM83CQ9BQN1 747 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 SLC32A1Q9H598 525 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 FBRSL1Q9HCM7 1045 aaKnown RBP19.88■□□□□ 0.77
CLN6-212ENST00000636020 PCDHA12Q9UN75 941 aa19.88■□□□□ 0.77
CLN6-212ENST00000636020 OTOL1A6NHN0 477 aaPredicted RBP19.87■□□□□ 0.77
CLN6-212ENST00000636020 ATP2B1P20020 1258 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 GRM5P41594 1212 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 NAMPTP43490 491 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 DUSP4Q13115 394 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 RUNX3Q13761 415 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 ATF7IP2Q5U623 682 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 PIK3AP1Q6ZUJ8 805 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 SYT13Q7L8C5 426 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 DEPTORQ8TB45 409 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 HPS4Q9NQG7 708 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 TOPORSQ9NS56 1045 aaPredicted RBP19.87■□□□□ 0.77
CLN6-212ENST00000636020 INVSQ9Y283 1065 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 ASB3Q9Y575 518 aa19.87■□□□□ 0.77
CLN6-212ENST00000636020 THADAQ6YHU6 1953 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 SPAARA0A1B0GVQ0 90 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 KCNE1P15382 129 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 DRD1P21728 446 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 RPS6KB1P23443 525 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 GABRR2P28476 465 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 ALDH1A3P47895 512 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 YARSP54577 528 aaKnown RBP19.86■□□□□ 0.77
CLN6-212ENST00000636020 ARHGAP15Q53QZ3 475 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 CYP2U1Q7Z449 544 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 DNAJB7Q7Z6W7 309 aaPredicted RBP19.86■□□□□ 0.77
CLN6-212ENST00000636020 C11orf74Q86VG3 221 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 PGLYRP2Q96PD5 576 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 TASP1Q9H6P5 420 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 PCDHB8Q9UN66 801 aa19.86■□□□□ 0.77
CLN6-212ENST00000636020 OAZ2O95190 189 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 FGF19O95750 216 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 OR4Q2P0C623 313 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 MCM4P33991 863 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 SIM1P81133 766 aaPredicted RBP19.85■□□□□ 0.77
CLN6-212ENST00000636020 DMC1Q14565 340 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 COL28A1Q2UY09 1125 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 FBXO43Q4G163 708 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 APBB1IPQ7Z5R6 666 aaPredicted RBP19.85■□□□□ 0.77
CLN6-212ENST00000636020 PIP4P1Q86T03 277 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 RPLP0P6Q8NHW5 317 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 PSMG2Q969U7 264 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 C18orf25Q96B23 403 aaPredicted RBP19.85■□□□□ 0.77
CLN6-212ENST00000636020 CCDC94Q9BW85 323 aaPredicted RBP19.85■□□□□ 0.77
CLN6-212ENST00000636020 EVLQ9UI08 416 aaPredicted RBP19.85■□□□□ 0.77
CLN6-212ENST00000636020 TNFSF13BQ9Y275 285 aa19.85■□□□□ 0.77
CLN6-212ENST00000636020 H0Y626 953 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 TRIM16O95361 564 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 SPATA31C1P0DKV0 1188 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 MARCKSP29966 332 aaPredicted RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 GALK1P51570 392 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 DGKEP52429 567 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 EFNA5P52803 228 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 OSTNP61366 133 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 EARS2Q5JPH6 523 aaKnown RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 CENPPQ6IPU0 288 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 OXER1Q8TDS5 423 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 BBC3Q96PG8 261 aaPredicted RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 POLR3CQ9BUI4 534 aaPredicted RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 KIFC3Q9BVG8 833 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 SMG9Q9H0W8 520 aaKnown RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 CDT1Q9H211 546 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 EBF3Q9H4W6 596 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 TTC12Q9H892 705 aaPredicted RBP19.84■□□□□ 0.77
CLN6-212ENST00000636020 ANKFY1Q9P2R3 1169 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 SLC27A5Q9Y2P5 690 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 SNX14Q9Y5W7 946 aa19.84■□□□□ 0.77
CLN6-212ENST00000636020 UPK3BL1B0FP48 263 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 UPK3BL2E5RIL1 263 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 CYP4F8P98187 520 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 AMPD2Q01433 879 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms