RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	LNX1	Q8TBB1	728 aa	Predicted RBP	27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	TUBGCP2	Q9BSJ2	902 aa		27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	IMPG2	Q9BZV3	1241 aa		27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	NSUN3	Q9H649	340 aa	Known RBP	27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	RAB20	Q9NX57	234 aa		27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	DSE	Q9UL01	958 aa		27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	COQ4	Q9Y3A0	265 aa		27.95	■■■□□ 2.06
UBE3A-222	ENST00000630907	HUS1	O60921	280 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	ASS1	P00966	412 aa	Known RBP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	PRKCSH	P14314	528 aa	Predicted RBP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	FOSL2	P15408	326 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	CDK11B	P21127	795 aa	Known RBP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	TNNC1	P63316	161 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	CETN1	Q12798	172 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	ZNF667	Q5HYK9	610 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	ANKS3	Q6ZW76	656 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	SEMA4D	Q92854	862 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	PPP2R3C	Q969Q6	453 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	HSD3B7	Q9H2F3	369 aa		27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907	NXF1	Q9UBU9	619 aa	Known RBP	27.94	■■■□□ 2.06
UBE3A-222	ENST00000630907		H7C4K7	107 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	CYP11A1	P05108	521 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	ZNF18	P17022	549 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	MRPL58	Q14197	206 aa	Known RBP	27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	PSMD5	Q16401	504 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	DPH6	Q7L8W6	267 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	METTL23	Q86XA0	190 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	TOP6BL	Q8N6T0	577 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	ANKRD20A12P	Q8NF67	263 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	FAM200A	Q8TCP9	573 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	PI4K2A	Q9BTU6	479 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	EMILIN2	Q9BXX0	1053 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	RXFP1	Q9HBX9	757 aa		27.93	■■■□□ 2.06
UBE3A-222	ENST00000630907	CREM	Q03060	361 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	YWHAH	Q04917	246 aa	Predicted RBP	27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	VWA3B	Q502W6	1294 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	WSCD1	Q658N2	575 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	OVOS1	Q6IE37	1185 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	ELMO3	Q96BJ8	720 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	MMS19	Q96T76	1030 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	27.92	■■■□□ 2.06	6e-8	■■■■■ 47.3
UBE3A-222	ENST00000630907	FNIP2	Q9P278	1114 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	MTRR	Q9UBK8	725 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	L1RE1	Q9UN81	338 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	BACE2	Q9Y5Z0	518 aa		27.92	■■■□□ 2.06
UBE3A-222	ENST00000630907	LRRN2	O75325	713 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	OAZ2	O95190	189 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	P4HA1	P13674	534 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	NOP14	P78316	857 aa	Known RBP	27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	KRT31	Q15323	416 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	TCEAL5	Q5H9L2	206 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	WDR44	Q5JSH3	913 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	SPOPL	Q6IQ16	392 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	ZNF280D	Q6N043	979 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	ADGRD2	Q7Z7M1	963 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	LUZP1	Q86V48	1076 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	TMEM86A	Q8N2M4	240 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	PDCL2	Q8N4E4	241 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	KLHL5	Q96PQ7	755 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	NDST4	Q9H3R1	872 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	TLE6	Q9H808	572 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	TAB2	Q9NYJ8	693 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	POLI	Q9UNA4	740 aa		27.91	■■■□□ 2.06
UBE3A-222	ENST00000630907	MYO7A	Q13402	2215 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	TPM2	P07951	284 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	CNP	P09543	421 aa	Known RBP	27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	TPM4	P67936	248 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	SOWAHA	Q2M3V2	549 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	CTXN3	Q4LDR2	81 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	MIIP	Q5JXC2	388 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	LIMS2	Q7Z4I7	341 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	RBM23	Q86U06	439 aa	Known RBP	27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	MICALL1	Q8N3F8	863 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	APOBEC3G	Q9HC16	384 aa	Known RBP	27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	LIMA1	Q9UHB6	759 aa	Known RBP	27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	VWA8	A3KMH1	1905 aa		27.9	■■■□□ 2.06
UBE3A-222	ENST00000630907	TEX28	O15482	410 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	RPL17	P18621	184 aa	Known RBP	27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	ADGRF2	Q8IZF7	708 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	THEM5	Q8N1Q8	247 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	EHBP1	Q8NDI1	1231 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	SPATA18	Q8TC71	538 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	CLSTN3	Q9BQT9	956 aa		27.89	■■■□□ 2.06
UBE3A-222	ENST00000630907	SZT2	Q5T011	3432 aa		27.89	■■■□□ 2.05
UBE3A-222	ENST00000630907	GOLGA6L19	H0YKK7	550 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	PES1	O00541	588 aa	Known RBP	27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	PER2	O15055	1255 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	TBC1D4	O60343	1298 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	FAM163B	P0C2L3	166 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	KLRC2	P26717	231 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	NRIP1	P48552	1158 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	NDUFV1	P49821	464 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	DUSP6	Q16828	381 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	CDCA3	Q99618	268 aa	Predicted RBP	27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	OXCT2	Q9BYC2	517 aa	Predicted RBP	27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	NIF3L1	Q9GZT8	377 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	VPS16	Q9H269	839 aa		27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	FBXL5	Q9UKA1	691 aa		27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms