RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 CCT8P50990 548 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 SSBP2P81877 361 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-208ENST00000625916 TFF2Q03403 129 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 TARDBPQ13148 414 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN1A-208ENST00000625916 TAPT1Q6NXT6 567 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 MIGA2Q7L4E1 593 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 AMOTL1Q8IY63 956 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 IL17RDQ8NFM7 739 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 CHAC2Q8WUX2 184 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 PBKQ96KB5 322 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
SCN1A-208ENST00000625916 A0A0B4J269 797 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TARM1B6A8C7 271 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 E7ENX8 843 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 F5H697 171 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SLC43A1O75387 559 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 PRKD3O94806 890 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 CD1AP06126 327 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 RHOP08100 348 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 AGXTP21549 392 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 DRD4P21917 467 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 EPHB2P29323 1055 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 CDC42EP1Q00587 391 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TAP2Q03519 686 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TUBB3Q13509 450 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 PLAC9Q5JTB6 97 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SLC9A4Q6AI14 798 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF365Q70YC5 407 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TMIEQ8NEW7 156 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 DENND1AQ8TEH3 1009 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 FBXO41Q8TF61 875 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 LRIG1Q96JA1 1093 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TRIB1Q96RU8 372 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SMOQ99835 787 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 ALG8Q9BVK2 526 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TPSD1Q9BZJ3 242 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SEMA4CQ9C0C4 833 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SLKQ9H2G2 1235 aaPredicted RBP4□□□□□ -1.77
SCN1A-208ENST00000625916 BHMT2Q9H2M3 363 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 SLC45A2Q9UMX9 530 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TBC1D30Q9Y2I9 924 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 PCDHA13Q9Y5I0 950 aa4□□□□□ -1.77
SCN1A-208ENST00000625916 TRIAP1O43715 76 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 MPGP29372 298 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 POU6F2P78424 691 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-208ENST00000625916 CLUL1Q15846 466 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 FLYWCH1Q4VC44 716 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 SLC44A4Q53GD3 710 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 MORN5Q5VZ52 161 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 SLC30A10Q6XR72 485 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 GADL1Q6ZQY3 521 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 YTHDF3Q7Z739 585 aaKnown RBP3.99□□□□□ -1.77
SCN1A-208ENST00000625916 NEK8Q86SG6 692 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 FAM9AQ8IZU1 332 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-208ENST00000625916 AFAP1L2Q8N4X5 818 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 IFI44Q8TCB0 444 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 FKBP10Q96AY3 582 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF48Q96MX3 618 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF277Q9NRM2 450 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-208ENST00000625916 EHD3Q9NZN3 535 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 SERGEFQ9UGK8 458 aa3.99□□□□□ -1.77
SCN1A-208ENST00000625916 POLRMTO00411 1230 aaKnown RBP3.98□□□□□ -1.77
SCN1A-208ENST00000625916 KCNAB3O43448 404 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 ZFXP17010 805 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-208ENST00000625916 NDUFB7P17568 137 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 CERS1P27544 350 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 WASP42768 502 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 NDUFV1P49821 464 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 CCT4P50991 539 aaKnown RBP3.98□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF280AP59817 542 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-208ENST00000625916 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 TMPRSS9Q7Z410 1059 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 RFKQ969G6 155 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 HDAC10Q969S8 669 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 BRIP1Q9BX63 1249 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 ACTRT3Q9BYD9 372 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 SH3BP4Q9P0V3 963 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 BTBD3Q9Y2F9 522 aa3.98□□□□□ -1.77
SCN1A-208ENST00000625916 TRIM38O00635 465 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 MOSPD3O75425 235 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 LATS1O95835 1130 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 CYP2D6P10635 497 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 FHL1Q13642 323 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 BMPR2Q13873 1038 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 RAB39AQ14964 217 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 GPR162Q16538 588 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 CEP85Q6P2H3 762 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 ZNF551Q7Z340 670 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-208ENST00000625916 SPATS2Q86XZ4 545 aaKnown RBP3.97□□□□□ -1.77
SCN1A-208ENST00000625916 WDR66Q8TBY9 1149 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 COG1Q8WTW3 980 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 SH2D3AQ9BRG2 576 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 PCDHB1Q9Y5F3 818 aa3.97□□□□□ -1.77
SCN1A-208ENST00000625916 SPATA31A3Q5VYP0 1347 aa3.96□□□□□ -1.77
SCN1A-208ENST00000625916 SMIM22K7EJ46 135 aa3.96□□□□□ -1.78
SCN1A-208ENST00000625916 PPP6CO00743 305 aa3.96□□□□□ -1.78
SCN1A-208ENST00000625916 GPR39O43194 453 aa3.96□□□□□ -1.78
SCN1A-208ENST00000625916 SGTAO43765 313 aa3.96□□□□□ -1.78
SCN1A-208ENST00000625916 JTBO76095 146 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms