RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 PIK3CDO00329 1044 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 GIT2Q14161 759 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 TAS2R42Q7RTR8 314 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 SH2D3AQ9BRG2 576 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 SLC13A4Q9UKG4 626 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 A0A0G2JLL6 359 aaPredicted RBP12.36□□□□□ -0.43
CHD2-205ENST00000625662 IQANK1A0A1B0GTG1 560 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
CHD2-205ENST00000625662 PRRT2Q7Z6L0 340 aaPredicted RBP12.36□□□□□ -0.43
CHD2-205ENST00000625662 MCUQ8NE86 351 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 PDZD8Q8NEN9 1154 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 DESI2Q9BSY9 194 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 ELOVL4Q9GZR5 314 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.435e-7■■■■□ 24.3
CHD2-205ENST00000625662 PCSK1NQ9UHG2 260 aa12.36□□□□□ -0.43
CHD2-205ENST00000625662 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 NXNQ6DKJ4 435 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 PPHLN1Q8NEY8 458 aaKnown RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 PTPN22Q9Y2R2 807 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 FTLP02792 175 aaPredicted RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHD2-205ENST00000625662 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 SLC30A1Q9Y6M5 507 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 CHD2O14647 1828 aaKnown RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 DNAJC6O75061 913 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 MFAP3LO75121 409 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 MYBP10242 640 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 FAM49BQ9NUQ9 324 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■□□□ 11.6
CHD2-205ENST00000625662 TRIM49BA6NDI0 452 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 NCAM1P13591 858 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 CCL23P55773 120 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 ATP11AP98196 1134 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 SMARCB1Q12824 385 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 SNX1Q13596 522 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 BRD3Q15059 726 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 PDK1Q15118 436 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
CHD2-205ENST00000625662 TRIM48Q8IWZ4 208 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 SRRDQ9UH36 339 aa12.35□□□□□ -0.43
CHD2-205ENST00000625662 GPD1P21695 349 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 HPDP32754 393 aaPredicted RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 PRKCQQ04759 706 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ATXN3LQ9H3M9 355 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 FAM170AA1A519 330 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 KRT37O76014 449 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 MAP4P27816 1152 aaKnown RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 CLNS1AP54105 237 aaKnown RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 BBS9Q3SYG4 887 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 RCOR2Q8IZ40 523 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 STMN2Q93045 179 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 CINPQ9BW66 212 aaPredicted RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 C1QTNF7Q9BXJ2 289 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 VPS9D1Q9Y2B5 631 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ELNP15502 786 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 RGS7P49802 495 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 WASHC5Q12768 1159 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 SPATA16Q9BXB7 569 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 MYO1DO94832 1006 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
CHD2-205ENST00000625662 SHC4Q6S5L8 630 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 VCXQ9H320 206 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 TMEM134Q9H6X4 195 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 AGPAT3Q9NRZ7 376 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
CHD2-205ENST00000625662 GOLGA8MH3BSY2 632 aa12.33□□□□□ -0.43
CHD2-205ENST00000625662 CYP26A1O43174 497 aa12.33□□□□□ -0.43
CHD2-205ENST00000625662 CAND2O75155 1236 aa12.33□□□□□ -0.43
CHD2-205ENST00000625662 POMCP01189 267 aa12.33□□□□□ -0.43
CHD2-205ENST00000625662 CUL2Q13617 745 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms