RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 FAM47EQ6ZV65 393 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 ASRGL1Q7L266 308 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 RDM1Q8NG50 284 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 HAPLN2Q9GZV7 340 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 MRPL47Q9HD33 250 aaKnown RBP16.11■□□□□ 0.17
LINC00552-201ENST00000625151 ARHGEF3Q9NR81 526 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 RIPK3Q9Y572 518 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 PCDHB4Q9Y5E5 795 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 SPAG7O75391 227 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 DGAT1O75907 488 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 CUL2Q13617 745 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 BAATQ14032 418 aaPredicted RBP16.11■□□□□ 0.17
LINC00552-201ENST00000625151 KAZNQ674X7 775 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 ECHDC2Q86YB7 292 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
LINC00552-201ENST00000625151 MCPH1Q8NEM0 835 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 PAIP2Q9BPZ3 127 aaKnown RBP16.11■□□□□ 0.17
LINC00552-201ENST00000625151 SENP7Q9BQF6 1050 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 PLCD4Q9BRC7 762 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 SAYSD1Q9NPB0 183 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 KLHL14Q9P2G3 628 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 DNPEPQ9ULA0 475 aa16.11■□□□□ 0.17
LINC00552-201ENST00000625151 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.11■□□□□ 0.17
LINC00552-201ENST00000625151 ZNF541Q9H0D2 1346 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 FAM47DPA6NHR8 397 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 RPSAP08865 295 aaKnown RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ETS1P14921 441 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 KCNA2P16389 499 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 NFX1Q12986 1120 aaKnown RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 FASTKD3Q14CZ7 662 aaKnown RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 HP1BP3Q5SSJ5 553 aaPredicted RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 RNF43Q68DV7 783 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 PPP1R21Q6ZMI0 780 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 VSIG10LQ86VR7 867 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ATP6V0A1Q93050 837 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 KIAA1683Q9H0B3 1180 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 STK38LQ9Y2H1 464 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 GJA3Q9Y6H8 435 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 EXOC1LA0A1B0GW35 172 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 LIASO43766 372 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 NR3C2P08235 984 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ABHD2P08910 425 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 RTP1P59025 263 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 PRKCEQ02156 737 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 MYO1EQ12965 1108 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ZBTB41Q5SVQ8 909 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 SCARA3Q6AZY7 606 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 TRABD2AQ86V40 505 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 PHF13Q86YI8 300 aaPredicted RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ANKRD35Q8N283 1001 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 IFT74Q96LB3 600 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 PITPNM3Q9BZ71 974 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 CYP26B1Q9NR63 512 aa16.1■□□□□ 0.17
LINC00552-201ENST00000625151 AGO2Q9UKV8 859 aaKnown RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 CTDP1Q9Y5B0 961 aaPredicted RBP16.1■□□□□ 0.17
LINC00552-201ENST00000625151 FZD9O00144 591 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 WNT10BO00744 389 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 DNALI1O14645 258 aaPredicted RBP16.09■□□□□ 0.17
LINC00552-201ENST00000625151 RGS20O76081 388 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 IL9RQ01113 521 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
LINC00552-201ENST00000625151 SPOCK2Q92563 424 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 SYT17Q9BSW7 474 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 SCINQ9Y6U3 715 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 ANP32DO95626 131 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 ASMTLO95671 621 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
LINC00552-201ENST00000625151 CCND2P30279 289 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 MTMR2Q13614 643 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 MTERF2Q49AM1 385 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 MFSD7Q6UXD7 560 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 RIBC1Q8N443 379 aaPredicted RBP16.09■□□□□ 0.17
LINC00552-201ENST00000625151 FEZF2Q8TBJ5 459 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 GPRASP2Q96D09 838 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
LINC00552-201ENST00000625151 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 KIAA1586Q9HCI6 787 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
LINC00552-201ENST00000625151 POC1B-GALNT4F8VUJ3 575 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 ZBED4O75132 1171 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 CCNB1P14635 433 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.17
LINC00552-201ENST00000625151 MSH2P43246 934 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.17
LINC00552-201ENST00000625151 ACVR2BQ13705 512 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 CAPN12Q6ZSI9 719 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 MTMR14Q8NCE2 650 aa16.08■□□□□ 0.17
LINC00552-201ENST00000625151 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms