RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, human

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-215	ENST00000624145	WDR41	Q9HAD4	459 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IL1RL2	Q9HB29	575 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ALG13	Q9NP73	1137 aa	Known RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PCDHA6	Q9UN73	950 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PCDHA8	Q9Y5H6	950 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	NUP160	Q12769	1436 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145		A0A087X0T9	212 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRPC5OS	A6NMA1	111 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZW10	O43264	779 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CAND2	O75155	1236 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CNOT3	O75175	753 aa	Known RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CIAO1	O76071	339 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PDE8B	O95263	885 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	GSTM1	P09488	218 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TCN1	P20061	433 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CHRM3	P20309	590 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SPR	P35270	261 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FNTA	P49354	379 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PUDP	Q08623	228 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PCSK7	Q16549	785 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KBTBD12	Q3ZCT8	623 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	C2CD6	Q53TS8	623 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FBXO42	Q6P3S6	717 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TMC5	Q6UXY8	1006 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	LRRC8D	Q7L1W4	858 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	GPR141	Q7Z602	305 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	EPHX4	Q8IUS5	362 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FAM9C	Q8IZT9	166 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SEPT5	Q99719	369 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PACSIN1	Q9BY11	444 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	STK33	Q9BYT3	514 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KLHL25	Q9H0H3	589 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIT1	Q9H3H1	467 aa	Known RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RBAK	Q9NYW8	714 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZBTB1	Q9Y2K1	713 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PITPNM2	Q9BZ72	1349 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CCDC189	A1A4V9	331 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PIK3CD	O00329	1044 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	BMP10	O95393	424 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FCER1A	P12319	257 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	NT5C2	P49902	561 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDC42EP1	Q00587	391 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SGSM1	Q2NKQ1	1148 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DGKK	Q5KSL6	1271 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PMF1	Q6P1K2	205 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KRT73	Q86Y46	540 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SYTL1	Q8IYJ3	562 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	UCMA	Q8WVF2	138 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SPIRE2	Q8WWL2	714 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	USP13	Q92995	863 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RMND5B	Q96G75	393 aa	Predicted RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CCDC3	Q9BQI4	270 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PPCS	Q9HAB8	311 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SENP2	Q9HC62	589 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	NEK6	Q9HC98	313 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	NPHS2	Q9NP85	383 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KLC4	Q9NSK0	619 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PCMTD2	Q9NV79	361 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	INTS13	Q9NVM9	706 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KLHL3	Q9UH77	587 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ANAPC2	Q9UJX6	822 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	VAV3	Q9UKW4	847 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PIN4	Q9Y237	131 aa	Known RBP	4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRAPPC8	Q9Y2L5	1435 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DYRK1B	Q9Y463	629 aa		4.22	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PRX	Q9BXM0	1461 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.21	□□□□□ -1.73	2e-6	■■■■■ 64.4
ANKRD28-215	ENST00000624145	FAM135B	Q49AJ0	1406 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	WWP2	O00308	870 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DNALI1	O14645	258 aa	Predicted RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FTL	P02792	175 aa	Predicted RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PIK3R1	P27986	724 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	HARS2	P49590	506 aa	Known RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MRPS25	P82663	173 aa	Known RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	GFPT1	Q06210	699 aa	Predicted RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TAF13	Q15543	124 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DUOXA2	Q1HG44	320 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TYW3	Q6IPR3	259 aa	Known RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDC73	Q6P1J9	531 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	OTOA	Q7RTW8	1153 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RCOR2	Q8IZ40	523 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DCP1B	Q8IZD4	617 aa	Known RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	LCORL	Q8N3X6	602 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SLC25A41	Q8N5S1	370 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	C1orf54	Q8WWF1	131 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RIN2	Q8WYP3	895 aa	Predicted RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CYFIP2	Q96F07	1278 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PNKP	Q96T60	521 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TINF2	Q9BSI4	451 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CNPY3	Q9BT09	278 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	THUMPD3	Q9BV44	507 aa	Known RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	VTA1	Q9NP79	307 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SCUBE2	Q9NQ36	999 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRPM5	Q9NZQ8	1165 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ATP6V1H	Q9UI12	483 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IPP	Q9Y573	584 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDY2A	Q9Y6F7	541 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDY1	Q9Y6F8	540 aa		4.21	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IQGAP2	Q13576	1575 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms