RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 VPS4AQ9UN37 437 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 PIN4Q9Y237 131 aaKnown RBP7.24□□□□□ -1.25
CDKL5-204ENST00000623364 PCDHB2Q9Y5E7 798 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 MYH6P13533 1939 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 KIAA1549LQ6ZVL6 1849 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 ESPL1Q14674 2120 aa7.24□□□□□ -1.25
CDKL5-204ENST00000623364 BAZ2BQ9UIF8 2168 aaKnown RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 GCOM1H8Y6P7 765 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 M0R2C6 588 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 TRIM66O15016 1216 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 MTSS1O43312 755 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 PCDHGA12O60330 932 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 LDOC1O95751 146 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 POLR2MP0CAP2 368 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 KCNA2P16389 499 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 SFPQP23246 707 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 TMOD1P28289 359 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 LSSP48449 732 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 NOVP48745 357 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 USP11P51784 963 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 UBE3CQ15386 1083 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 TBR1Q16650 682 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 QRICH1Q2TAL8 776 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 FAM171A1Q5VUB5 890 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 CAPRIN2Q6IMN6 1127 aaKnown RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 EZH1Q92800 747 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 CD101Q93033 1021 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 EAF2Q96CJ1 260 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 ZNF419Q96HQ0 510 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 STRBPQ96SI9 672 aaKnown RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 MEIS3Q99687 375 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 TMEM47Q9BQJ4 181 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 UNKQ9C0B0 810 aaKnown RBP7.23□□□□□ -1.25
CDKL5-204ENST00000623364 EBF3Q9H4W6 596 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 POLR1BQ9H9Y6 1135 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 UBN1Q9NPG3 1134 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 MYO16Q9Y6X6 1858 aa7.23□□□□□ -1.25
CDKL5-204ENST00000623364 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ARHGAP10A1A4S6 786 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 DHX16O60231 1041 aaKnown RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 NDUFS2O75306 463 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 C22orf31O95567 290 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 APPP05067 770 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 PRKCGP05129 697 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 GNAI3P08754 354 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 GOLGA8HP0CJ92 632 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 GNLYP22749 145 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 MAOBP27338 520 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ACADVLP49748 655 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 CLCN3P51790 818 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 SEC13P55735 322 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ASIC1P78348 528 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 DNAJC3Q13217 504 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ILKQ13418 452 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 PDAP1Q13442 181 aaKnown RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 HEATR4Q86WZ0 1026 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 FAM114A1Q8IWE2 563 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 MCEMP1Q8IX19 187 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ADGRF4Q8IZF3 695 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ZCCHC9Q8N567 271 aaKnown RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 SHKBP1Q8TBC3 707 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 NLRP7Q8WX94 980 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ZNF668Q96K58 619 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 CNDP2Q96KP4 475 aaKnown RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 TMEM245Q9H330 911 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 CPVLQ9H3G5 476 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ASCL3Q9NQ33 180 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 HPS4Q9NQG7 708 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 ATXN7L1Q9ULK2 861 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-204ENST00000623364 BOLA1Q9Y3E2 137 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
CDKL5-204ENST00000623364 TCRBV21S2A2A0A5A6 115 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 OTOL1A6NHN0 477 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 MEI4A8MW99 385 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 BCAT2O15382 392 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 RANBP6O60518 1105 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 ZNF217O75362 1048 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 CSDE1O75534 798 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 KRT7P08729 469 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 HNRNPLP14866 589 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 RBMS1P29558 406 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 CCT8P50990 548 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 CLN3Q13286 438 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 NAIF1Q69YI7 327 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 MRPL10Q7Z7H8 261 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 NSUN7Q8NE18 718 aaKnown RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 RFFLQ8WZ73 363 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 GPRASP2Q96D09 838 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 MTMR9Q96QG7 549 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
CDKL5-204ENST00000623364 GCOM2Q9BZD3 368 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-204ENST00000623364 MIR1-1HGQ9H1L0 117 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms