RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SCN1AP35498 2009 aa15.05■□□□□ 0
PCDHGC3-208ENST00000622836 WDR27A2RRH5 827 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 OR6C75A6NL08 312 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 CCL16O15467 120 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 TBC1D4O60343 1298 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 HUS1O60921 280 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 PHACTR2O75167 634 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 XYLBO75191 536 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 LRG1P02750 347 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 HNRNPA1P09651 372 aaKnown RBP eCLIP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 ATF2P15336 505 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 RPL13P26373 211 aaKnown RBP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 UVSSAQ2YD98 709 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 ZNF658Q5TYW1 1059 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 TPGS2Q68CL5 300 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 SLC9A9Q8IVB4 645 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 THEM5Q8N1Q8 247 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 TDRD5Q8NAT2 981 aaKnown RBP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 FEZF2Q8TBJ5 459 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 GTPBP4Q9BZE4 634 aaKnown RBP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 CYP4F11Q9HBI6 524 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 TRAF3IP3Q9Y228 551 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 PTPRJQ12913 1337 aa15.05■□□□□ -0
PCDHGC3-208ENST00000622836 MTCL1Q9Y4B5 1905 aaKnown RBP15.05■□□□□ -0
PCDHGC3-208ENST00000622836 LOC730098B7Z3J9 87 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 CYP11A1P05108 521 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 OR4Q2P0C623 313 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 NR2F2P24468 414 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 ADCY1Q08828 1119 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 BIRC3Q13489 604 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 TRPC3Q13507 836 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 STIM1Q13586 685 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 MYBPC2Q14324 1141 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 WSCD1Q658N2 575 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 ISM2Q6H9L7 571 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 ELOA2Q8IYF1 753 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-208ENST00000622836 ZNF707Q96C28 371 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-208ENST00000622836 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-208ENST00000622836 HPDLQ96IR7 371 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
PCDHGC3-208ENST00000622836 DMAC2Q9NW81 257 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 AFF4Q9UHB7 1163 aaKnown RBP15.04■□□□□ -0
PCDHGC3-208ENST00000622836 SIX4Q9UIU6 781 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 SNX9Q9Y5X1 595 aa15.04■□□□□ -0
PCDHGC3-208ENST00000622836 CLUHO75153 1309 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 ABLIM3O94929 683 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 HOXA9P31269 272 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 CASP4P49662 377 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 RNF19BQ6ZMZ0 732 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 RTL10Q7L3V2 364 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 OTOP3Q7RTS5 596 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 RNF135Q8IUD6 432 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 PGLYRP2Q96PD5 576 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 MMS19Q96T76 1030 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 TSG101Q99816 390 aa15.03■□□□□ -0
PCDHGC3-208ENST00000622836 WDR6Q9NNW5 1121 aaKnown RBP15.03■□□□□ -0
PCDHGC3-208ENST00000622836 LRRIQ3A6PVS8 624 aaPredicted RBP15.02■□□□□ -0
PCDHGC3-208ENST00000622836 C2CD4DB7Z1M9 353 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 KRT13P13646 458 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 GBP2P32456 591 aaPredicted RBP15.02■□□□□ -0
PCDHGC3-208ENST00000622836 PRCPP42785 496 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 AP3M2P53677 418 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 ADAM9Q13443 819 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 GET4Q7L5D6 327 aaPredicted RBP15.02■□□□□ -0
PCDHGC3-208ENST00000622836 GRASPQ7Z6J2 395 aaPredicted RBP15.02■□□□□ -0
PCDHGC3-208ENST00000622836 TCEAL8Q8IYN2 117 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 ELMOD1Q8N336 334 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 PLCD3Q8N3E9 789 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 PDCL2Q8N4E4 241 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 SPATA20Q8TB22 786 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 PARD3BQ8TEW8 1205 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 TMEM174Q8WUU8 243 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 BORCS6Q96GS4 357 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 RHOBTB2Q9BYZ6 727 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 MUTYHQ9UIF7 546 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 MAFFQ9ULX9 164 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 INSL5Q9Y5Q6 135 aa15.02■□□□□ -0
PCDHGC3-208ENST00000622836 C2orf16Q68DN1 1984 aa15.02□□□□□ -0.01
PCDHGC3-208ENST00000622836 BIN1O00499 593 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 PSMA7O14818 248 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 DCXO43602 365 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 SEC24AO95486 1093 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 ALADP13716 330 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 PSMC2P35998 433 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 VAMP7P51809 220 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 MYL7Q01449 175 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 TSPY1Q01534 308 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 GPR17Q13304 367 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 CAMK4Q16566 473 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 NFIL3Q16649 462 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 EDRF1Q3B7T1 1238 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 SLC39A12Q504Y0 691 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 SCARA3Q6AZY7 606 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 INTS8Q75QN2 995 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 FAM186BQ8IYM0 893 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 ADGRF2Q8IZF7 708 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 TMEM86AQ8N2M4 240 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms