RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
GABRB3-215ENST00000622697 RBP5P82980 135 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 EFCAB12Q6NXP0 572 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 CXorf38Q8TB03 319 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 SPIRE2Q8WWL2 714 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 IFT43Q96FT9 208 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 ZDHHC15Q96MV8 337 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 WWP1Q9H0M0 922 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 PAPOLAP51003 745 aaKnown RBP16.95■□□□□ 0.3
GABRB3-215ENST00000622697 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
GABRB3-215ENST00000622697 CENPKQ9BS16 269 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 NIF3L1Q9GZT8 377 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 RAB21Q9UL25 225 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 CCDC22O60826 627 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 CHEK2O96017 543 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 APOEP02649 317 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 Q4G0T1 1027 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 AFG1LQ8WV93 481 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 SLURP2P0DP57 97 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 ZFXP17010 805 aaPredicted RBP16.95■□□□□ 0.3
GABRB3-215ENST00000622697 CAP2P40123 477 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 KCNA1Q09470 495 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 MORF4L2Q15014 288 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 TTC8Q8TAM2 541 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 MTMR12Q9C0I1 747 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 KRT82Q9NSB4 513 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 TRIM33Q9UPN9 1127 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 KRT4P19013 534 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 SH3BGRP55822 239 aaPredicted RBP16.95■□□□□ 0.3
GABRB3-215ENST00000622697 TSPY1Q01534 308 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 EHD4Q9H223 541 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 THEGQ9P2T0 379 aa16.95■□□□□ 0.3
GABRB3-215ENST00000622697 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 TPI1P60174 286 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 AMHR2Q16671 573 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 WDR35Q9P2L0 1181 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 ITGB3P05106 788 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 CENPCQ03188 943 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 RABGAP1LQ5R372 815 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 MROH9Q5TGP6 573 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 TCF7P36402 384 aaPredicted RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 STX3Q13277 289 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 MOXD1Q6UVY6 613 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 CREG2Q8IUH2 290 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 SCG3Q8WXD2 468 aaKnown RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 SEMA4AQ9H3S1 761 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 ZBBXA8MT70 800 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 PDE2AO00408 941 aaPredicted RBP16.94■□□□□ 0.3
GABRB3-215ENST00000622697 EPHB6O15197 1021 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 FNTAP49354 379 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 SMARCAD1Q9H4L7 1026 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 HACD3Q9P035 362 aa16.94■□□□□ 0.3
GABRB3-215ENST00000622697 GNAT1P11488 350 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 PHEXP78562 749 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 TATDN2Q93075 761 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 CDC42EP4Q9H3Q1 356 aaKnown RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 PPP1R12AO14974 1030 aaPredicted RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 PRAMEP78395 509 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 TMED1Q13445 227 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 MST1RQ04912 1400 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 FOXP2O15409 715 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 IL1R1P14778 569 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 DPEP1P16444 411 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ARHGEF19Q8IW93 802 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 THTPAQ9BU02 230 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 SPON2Q9BUD6 331 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ARHGEF37A1IGU5 675 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 RCCD1A6NED2 376 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 HIC1Q14526 733 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 CAPRIN2Q6IMN6 1127 aaKnown RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 SUN2Q9UH99 717 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ASB14A6NK59 587 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 EML1O00423 815 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 ZNF677Q86XU0 584 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 TSEN2Q8NCE0 465 aaKnown RBP16.93■□□□□ 0.3
GABRB3-215ENST00000622697 CEP70Q8NHQ1 597 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
GABRB3-215ENST00000622697 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
GABRB3-215ENST00000622697 GOLGA7BQ2TAP0 167 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 TTC39CQ8N584 583 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 APPL2Q8NEU8 664 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 TNIP3Q96KP6 325 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 NT5C1AQ9BXI3 368 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms