RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TDRD12Q587J7 1177 aaKnown RBP19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 TMEM270Q6UE05 265 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 IRF2BP2Q7Z5L9 587 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 UBR7Q8N806 425 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 CHP1Q99653 195 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 SDCBP2Q9H190 292 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 NRDE2Q9H7Z3 1164 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 GDAP2Q9NXN4 497 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 DNAJB4Q9UDY4 337 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 COL4A6Q14031 1691 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 CYP26A1O43174 497 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 SERPING1P05155 500 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 DCLRE1AQ6PJP8 1040 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 TMTC1Q8IUR5 882 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 HCSTQ9UBK5 93 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 SOWAHDA6NJG2 315 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 PLEKP08567 350 aaPredicted RBP19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 CDK17Q00537 523 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 HGSNATQ68CP4 663 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 DSTYKQ6XUX3 929 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 RBBP8NLQ8NC74 664 aaPredicted RBP19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 KIAA1524Q8TCG1 905 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 HERVK_113Q902F9 699 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 SPTLC3Q9NUV7 552 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 CXXC1Q9P0U4 656 aaPredicted RBP19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 ARHGAP20Q9P2F6 1191 aa19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 PRG3Q9Y2Y8 225 aaPredicted RBP19.05■□□□□ 0.64
PTCHD3-202ENST00000622555 CYB561D2O14569 222 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 HUS1O60921 280 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 KIF4AO95239 1232 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 PRKCIP41743 596 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 SOWAHAQ2M3V2 549 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 APPL2Q8NEU8 664 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 ZNF689Q96CS4 500 aaPredicted RBP19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 SENP8Q96LD8 212 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 HAUS4Q9H6D7 363 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 CNTN6Q9UQ52 1028 aa19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 BZW2Q9Y6E2 419 aaKnown RBP19.04■□□□□ 0.64
PTCHD3-202ENST00000622555 F8W810 466 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 ITGB1P05556 798 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 EIF4A3P38919 411 aaKnown RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 ZNF394Q53GI3 561 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 CD300LGQ6UXG3 332 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 TTC39CQ8N584 583 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 TOP6BLQ8N6T0 577 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 YME1L1Q96TA2 773 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 MRPL45Q9BRJ2 306 aaKnown RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 TMEM175Q9BSA9 504 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 MTIF3Q9H2K0 278 aaKnown RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 FAM124BQ9H5Z6 455 aaPredicted RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 NHEJ1Q9H9Q4 299 aaPredicted RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 L1RE1Q9UN81 338 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 SLC4A7Q9Y6M7 1214 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 ARHGAP6O43182 974 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 ALDH2P05091 517 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 PAX3P23760 479 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 BRCC3P46736 316 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 SLC11A1P49279 550 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 AARSP49588 968 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 TIGD5Q53EQ6 642 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 SLC47A2Q86VL8 602 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 DEF6Q9H4E7 631 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 RC3H2Q9HBD1 1191 aaKnown RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 ACP6Q9NPH0 428 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 BARX2Q9UMQ3 279 aaPredicted RBP19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 FAN1Q9Y2M0 1017 aa19.03■□□□□ 0.64
PTCHD3-202ENST00000622555 CEP290O15078 2479 aa19.02■□□□□ 0.64
PTCHD3-202ENST00000622555 TMEM189-UBE2V1I3L0A0 370 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 I3L4J1 428 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 NRP1O14786 923 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 CILPO75339 1184 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 TACC1O75410 805 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 PDE6CP51160 858 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 ZNF132P52740 706 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 BPIFB4P59827 614 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 PTK2Q05397 1052 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 INCA1Q0VD86 236 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 BTG3Q14201 252 aaPredicted RBP19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 MTF1Q14872 753 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 DPH6Q7L8W6 267 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 CMTR2Q8IYT2 770 aaKnown RBP19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 ADGRF2Q8IZF7 708 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 PDCL2Q8N4E4 241 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 CCDC42Q96M95 316 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 ZBED2Q9BTP6 218 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 COLEC11Q9BWP8 271 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 HMGXB4Q9UGU5 601 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 PYCARDQ9ULZ3 195 aa19.02■□□□□ 0.63
PTCHD3-202ENST00000622555 TSC2P49815 1807 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 SSU72P8A0A1W2PR75 194 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 GJB5O95377 273 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 CALCAP01258 141 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 GALTP07902 379 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 ODC1P11926 461 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 CYP11B1P15538 503 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 MAGEA10P43363 369 aaPredicted RBP19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 NDST1P52848 882 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms