RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 STAU1O95793 577 aaKnown RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 ODC1P11926 461 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 PTMSP20962 102 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 KLRC2P26717 231 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 NDUFV1P49821 464 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 YWHAHQ04917 246 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 BIRC3Q13489 604 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 NCOA4Q13772 614 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 SKIV2LQ15477 1246 aaKnown RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 NFKBIBQ15653 356 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 WSCD1Q658N2 575 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 LLGL2Q6P1M3 1020 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 LILRA6Q6PI73 481 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 USP37Q86T82 979 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TRIM59Q8IWR1 403 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TAS1R2Q8TE23 839 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TMEM8AQ9HCN3 771 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 ARMCX3Q9UH62 379 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 FBXL5Q9UKA1 691 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 SNX9Q9Y5X1 595 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 CDY1Q9Y6F8 540 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 DOCK6Q96HP0 2047 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 WDR27A2RRH5 827 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TGM5O43548 720 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 NCK2O43639 380 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 ADH1AP07327 375 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 GTF2H1P32780 548 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 OR1D2P34982 312 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TFF2Q03403 129 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 TYRO3Q06418 890 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 STX1AQ16623 288 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 CT47A1Q5JQC4 288 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 OVOS1Q6IE37 1185 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 PDXDC1Q6P996 788 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 SASS6Q6UVJ0 657 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 PDCL2Q8N4E4 241 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 OR10T2Q8NGX3 314 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 MSLNLQ96KJ4 702 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
CBWD3-217ENST00000621474 DACH1Q9UI36 760 aa15.39■□□□□ 0.05
CBWD3-217ENST00000621474 A0A0C4DFX4 3053 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 HLA-DRAP01903 254 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 ROR1Q01973 937 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 CREMQ03060 361 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 RAB33AQ14088 237 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 CCDC40Q4G0X9 1142 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 CTXN3Q4LDR2 81 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 KRT39Q6A163 491 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 PALB2Q86YC2 1186 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 HLA-CQ95604 372 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 SYAP1Q96A49 352 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-217ENST00000621474 TMEM209Q96SK2 561 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 NME7Q9Y5B8 376 aa15.38■□□□□ 0.05
CBWD3-217ENST00000621474 FSD2A1L4K1 749 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 H3BQ06 376 aaPredicted RBP15.37■□□□□ 0.05
CBWD3-217ENST00000621474 GABRDO14764 452 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 HCRTO43612 131 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 PHACTR2O75167 634 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 VNN2O95498 520 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
CBWD3-217ENST00000621474 KCNA5P22460 613 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 ATICP31939 592 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 MXI1P50539 228 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 TRPC3Q13507 836 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 WDR72Q3MJ13 1102 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 SPOPLQ6IQ16 392 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 SYCE2Q6PIF2 218 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 PPFIBP1Q86W92 1011 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 OSTM1Q86WC4 334 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 TOP6BLQ8N6T0 577 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
CBWD3-217ENST00000621474 PI4K2AQ9BTU6 479 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 DNAJC25Q9H1X3 360 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 APOBEC3GQ9HC16 384 aaKnown RBP15.37■□□□□ 0.05
CBWD3-217ENST00000621474 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 PTPRDP23468 1912 aa15.37■□□□□ 0.05
CBWD3-217ENST00000621474 SYCE3A1L190 88 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 ABLIM3O94929 683 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 GNA14O95837 355 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 GLUD1P00367 558 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 C1RP00736 705 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 OR4Q2P0C623 313 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 SPATA31D3P0C874 917 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 ZNF699Q32M78 642 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 SPATA31D4Q6ZUB0 917 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 ENOX1Q8TC92 643 aaKnown RBP15.36■□□□□ 0.05
CBWD3-217ENST00000621474 SAMSN1Q9NSI8 373 aaKnown RBP15.36■□□□□ 0.05
CBWD3-217ENST00000621474 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 DSEQ9UL01 958 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms