RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 USP34Q70CQ2 3546 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 ANHXE9PGG2 379 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 SYN3O14994 580 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 GFRA3O60609 400 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 ERCC5P28715 1186 aaPredicted RBP17.44■□□□□ 0.38
CD40-207ENST00000620709 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 DDX12PQ92771 950 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 TBX20Q9UMR3 447 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 CACNA1HO95180 2353 aa17.44■□□□□ 0.38
CD40-207ENST00000620709 ZFHX2Q9C0A1 2572 aaPredicted RBP17.43■□□□□ 0.38
CD40-207ENST00000620709 WDR27A2RRH5 827 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 MYL5Q02045 173 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 UNC13DQ70J99 1090 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 MTSS1LQ765P7 747 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 APPL2Q8NEU8 664 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 ZNF461Q8TAF7 563 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 MCRS1Q96EZ8 462 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 KXD1Q9BQD3 176 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 MSTO1Q9BUK6 570 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 RPF1Q9H9Y2 349 aaKnown RBP17.43■□□□□ 0.38
CD40-207ENST00000620709 TBC1D17Q9HA65 648 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 FBXL5Q9UKA1 691 aa17.43■□□□□ 0.38
CD40-207ENST00000620709 PDCD11Q14690 1871 aaKnown RBP17.43■□□□□ 0.38
CD40-207ENST00000620709 LACTBL1A8MY62 500 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 CPB1P15086 417 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 NMT1P30419 496 aaKnown RBP17.42■□□□□ 0.38
CD40-207ENST00000620709 GUCY2FP51841 1108 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 CCDC173Q0VFZ6 552 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 SLC8B1Q6J4K2 584 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 ZNF280DQ6N043 979 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 DSTYKQ6XUX3 929 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 DYMQ7RTS9 669 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 DTWD2Q8NBA8 298 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 SUSD3Q96L08 255 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 CORO1BQ9BR76 489 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 PLEKHA5Q9HAU0 1116 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 ARHGEF3Q9NR81 526 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 PCDHB8Q9UN66 801 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 TIMM13Q9Y5L4 95 aaPredicted RBP17.42■□□□□ 0.38
CD40-207ENST00000620709 SEC24AO95486 1093 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 RHOP08100 348 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 PTPN2P17706 415 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 GPC5P78333 572 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 PLCB2Q00722 1185 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 STIM1Q13586 685 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 NPAS3Q8IXF0 933 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 CCDC105Q8IYK2 499 aa17.42■□□□□ 0.38
CD40-207ENST00000620709 UBQLN1Q9UMX0 589 aaKnown RBP17.42■□□□□ 0.38
CD40-207ENST00000620709 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 PPP1R3GB7ZBB8 358 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 OGTO15294 1046 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 ABLIM3O94929 683 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 DCNP07585 359 aaKnown RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 POU2F2P09086 479 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 IDEP14735 1019 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 ATF2P15336 505 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 PPP1R2P41236 205 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 NCAPHQ15003 741 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 ENOX2Q16206 610 aaKnown RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 KYAT1Q16773 422 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 ZC2HC1CQ53FD0 456 aaPredicted RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 RTL10Q7L3V2 364 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 FRMD5Q7Z6J6 570 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 ENOX1Q8TC92 643 aaKnown RBP17.41■□□□□ 0.38
CD40-207ENST00000620709 DNAJC19Q96DA6 116 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
CD40-207ENST00000620709 MYO15AQ9UKN7 3530 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 CD44P16070 742 aaKnown RBP17.4■□□□□ 0.38
CD40-207ENST00000620709 CEBPBP17676 345 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 ZNF131P52739 623 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 YWHAHQ04917 246 aaPredicted RBP17.4■□□□□ 0.38
CD40-207ENST00000620709 PSMD2Q13200 908 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 MRPL58Q14197 206 aaKnown RBP17.4■□□□□ 0.38
CD40-207ENST00000620709 ANGPT1Q15389 498 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 SLC5A9Q2M3M2 681 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 USP37Q86T82 979 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 CCDC65Q8IXS2 484 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 SLC2A4RGQ9NR83 387 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
CD40-207ENST00000620709 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 TBC1D4O60343 1298 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 OR4Q2P0C623 313 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 TWF1Q12792 350 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 PAK1Q13153 545 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 COBLL1Q53SF7 1204 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 TPGS2Q68CL5 300 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 JADE1Q6IE81 842 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 SARM1Q6SZW1 724 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 RNF19BQ6ZMZ0 732 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.37
CD40-207ENST00000620709 TCEAL8Q8IYN2 117 aa17.39■□□□□ 0.37
CD40-207ENST00000620709 ADSSL1Q8N142 457 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms