RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 DSTYKQ6XUX3 929 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 ARHGEF19Q8IW93 802 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 ZNF560Q96MR9 790 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 SAMD11Q96NU1 681 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 ZBP1Q9H171 429 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 CHST7Q9NS84 486 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 GCNT4Q9P109 453 aa14.65□□□□□ -0.06
NEK3-210ENST00000620675 AJAP1Q9UKB5 411 aaPredicted RBP14.65□□□□□ -0.06
NEK3-210ENST00000620675 ADAM12O43184 909 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 FGFR3P22607 806 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 FANCCQ00597 558 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 SV2CQ496J9 727 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 PLPP4Q5VZY2 271 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 OSTM1Q86WC4 334 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 PDCL2Q8N4E4 241 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 INTS2Q9H0H0 1204 aaKnown RBP14.64□□□□□ -0.07
NEK3-210ENST00000620675 PTPRDP23468 1912 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 WEE2P0C1S8 567 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 PON1P27169 355 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 ASPAP45381 313 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 KRT17Q04695 432 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 SGSM1Q2NKQ1 1148 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 KIAA0319Q5VV43 1072 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 GLYCTKQ8IVS8 523 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 EHBP1Q8NDI1 1231 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 KBTBD7Q8WVZ9 684 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 MMS19Q96T76 1030 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 MRPL45Q9BRJ2 306 aaKnown RBP14.64□□□□□ -0.07
NEK3-210ENST00000620675 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 TLR9Q9NR96 1032 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 GDAP2Q9NXN4 497 aa14.64□□□□□ -0.07
NEK3-210ENST00000620675 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 PMM2O15305 246 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 PNPLA4P41247 253 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 ZNF667Q5HYK9 610 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 VARS2Q5ST30 1063 aaKnown RBP14.63□□□□□ -0.07
NEK3-210ENST00000620675 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 PHLDB3Q6NSJ2 640 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 TRIM65Q6PJ69 517 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 RRAGAQ7L523 313 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 TMC7Q7Z402 723 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 LIMS2Q7Z4I7 341 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 ADGRD2Q7Z7M1 963 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 LNX1Q8TBB1 728 aaPredicted RBP14.63□□□□□ -0.07
NEK3-210ENST00000620675 RIN2Q8WYP3 895 aaPredicted RBP14.63□□□□□ -0.07
NEK3-210ENST00000620675 TMEM209Q96SK2 561 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 LPIN3Q9BQK8 851 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 TTPALQ9BTX7 342 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 HERC2P3Q9BVR0 1158 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
NEK3-210ENST00000620675 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
NEK3-210ENST00000620675 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
NEK3-210ENST00000620675 EPHB6O15197 1021 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 LILRB3O75022 631 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 STAU1O95793 577 aaKnown RBP14.62□□□□□ -0.07
NEK3-210ENST00000620675 ATICP31939 592 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 CA8P35219 290 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 ORC1Q13415 861 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 PTPN14Q15678 1187 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 USP41Q3LFD5 358 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 ENTPD7Q9NQZ7 604 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 IFNKQ9P0W0 207 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 HMGXB4Q9UGU5 601 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 LZTS1Q9Y250 596 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 A0A1B0GTH6 734 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 FSCN2O14926 492 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 P4HA2O15460 535 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 N4BP1O75113 896 aaKnown RBP14.62□□□□□ -0.07
NEK3-210ENST00000620675 SERPINC1P01008 464 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 CTSAP10619 480 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 ACAT1P24752 427 aaKnown RBP14.62□□□□□ -0.07
NEK3-210ENST00000620675 LMO2P25791 158 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 GLUD2P49448 558 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 DSG1Q02413 1049 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 UBXN1Q04323 297 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 EXOC3L4Q17RC7 722 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
NEK3-210ENST00000620675 GBP6Q6ZN66 633 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 SIK3Q9Y2K2 1263 aa14.62□□□□□ -0.07
NEK3-210ENST00000620675 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.62□□□□□ -0.07
NEK3-210ENST00000620675 TRAPPC3O43617 180 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 CXCL14O95715 111 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 OR4Q2P0C623 313 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 ODC1P11926 461 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 GTF2F1P35269 517 aaKnown RBP eCLIP14.61□□□□□ -0.07
NEK3-210ENST00000620675 TNNC1P63316 161 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 RBM10P98175 930 aaKnown RBP14.61□□□□□ -0.07
NEK3-210ENST00000620675 MRPL58Q14197 206 aaKnown RBP14.61□□□□□ -0.07
NEK3-210ENST00000620675 NR1I3Q14994 352 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 SYCP1Q15431 976 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 ADGRF2Q8IZF7 708 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 OR10T2Q8NGX3 314 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 MICAL1Q8TDZ2 1067 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 KREMEN1Q96MU8 473 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 GUCD1Q96NT3 240 aa14.61□□□□□ -0.07
NEK3-210ENST00000620675 BCO2Q9BYV7 579 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms