RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ZC3H11AO75152 810 aaKnown RBP eCLIP23.11■■□□□ 1.29
SGMS1-210ENST00000619438 MOCS3O95396 460 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 PBX3P40426 434 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 FMO5P49326 533 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 GTF2BQ00403 316 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 NAB2Q15742 525 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 TIGD5Q53EQ6 642 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 FMNL3Q8IVF7 1028 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 SPIRE2Q8WWL2 714 aa23.11■■□□□ 1.29
SGMS1-210ENST00000619438 NXF3Q9H4D5 531 aaKnown RBP23.11■■□□□ 1.29
SGMS1-210ENST00000619438 K7ENM7 598 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 MAPK13O15264 365 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 GFPT2O94808 682 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 POMCP01189 267 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 TCP1P17987 556 aaKnown RBP23.1■■□□□ 1.29
SGMS1-210ENST00000619438 AKAP5P24588 427 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 PPM1AP35813 382 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 BCAR1P56945 870 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 STRN3Q13033 797 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 ATF7IP2Q5U623 682 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 IQCEQ6IPM2 695 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 WDR93Q6P2C0 686 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 GAD1Q99259 594 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 IKZF4Q9H2S9 585 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 PDZD7Q9H5P4 517 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 SPG21Q9NZD8 308 aa23.1■■□□□ 1.29
SGMS1-210ENST00000619438 A0A087X0T9 212 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NT5C1B-RDH14C9J2C7 533 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 FAM228BP0C875 321 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 APBB1IPQ7Z5R6 666 aaPredicted RBP23.09■■□□□ 1.29
SGMS1-210ENST00000619438 SYCP3Q8IZU3 236 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NOA1Q8NC60 698 aaKnown RBP23.09■■□□□ 1.29
SGMS1-210ENST00000619438 MMS19Q96T76 1030 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 TCHPQ9BT92 498 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 MRPL4Q9BYD3 311 aaKnown RBP23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NSUN3Q9H649 340 aaKnown RBP23.09■■□□□ 1.29
SGMS1-210ENST00000619438 ARHGAP28Q9P2N2 729 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 SALL4Q9UJQ4 1053 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 GIT1Q9Y2X7 761 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 ARL5CA6NH57 179 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 ERLIN1O75477 346 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 MLH1P40692 756 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 AFF1P51825 1210 aaKnown RBP23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NCKAP1LP55160 1127 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 UBE3AQ05086 875 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 PTK2Q05397 1052 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 BFSP1Q12934 665 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 HVCN1Q96D96 273 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 PNKPQ96T60 521 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NRDE2Q9H7Z3 1164 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 NENFQ9UMX5 172 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 HYOU1Q9Y4L1 999 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 ATG2AQ2TAZ0 1938 aa23.09■■□□□ 1.29
SGMS1-210ENST00000619438 TARSL2A2RTX5 802 aaKnown RBP23.08■■□□□ 1.29
SGMS1-210ENST00000619438 H0YCG3 227 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 ALDH2P05091 517 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 EDN1P05305 212 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 FERP16591 822 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 RFX1P22670 979 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 DNAJB1P25685 340 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 CYP2J2P51589 502 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 TCEAL5Q5H9L2 206 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 INTS8Q75QN2 995 aaKnown RBP23.08■■□□□ 1.29
SGMS1-210ENST00000619438 ZNF571Q7Z3V5 609 aaPredicted RBP23.08■■□□□ 1.29
SGMS1-210ENST00000619438 HLA-CQ95604 372 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 PPP2R3CQ969Q6 453 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 KLK14Q9P0G3 267 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 THEGQ9P2T0 379 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 ADAMTS1Q9UHI8 967 aa23.08■■□□□ 1.29
SGMS1-210ENST00000619438 CARNS1A5YM72 827 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 P4HA2O15460 535 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 EXOC3O60645 756 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 SRGAP2O75044 1071 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 MCM3P25205 808 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 PLCB3Q01970 1234 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 EEF1DP3Q658K8 133 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 EP400NLQ6ZTU2 488 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 ZNF280BQ86YH2 543 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 CREG2Q8IUH2 290 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 TMEM161BQ8NDZ6 487 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 TMEM169Q96HH4 297 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 ZFP42Q96MM3 310 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 ACO2Q99798 780 aaKnown RBP23.07■■□□□ 1.28
SGMS1-210ENST00000619438 TARS2Q9BW92 718 aaKnown RBP23.07■■□□□ 1.28
SGMS1-210ENST00000619438 STK33Q9BYT3 514 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 SNTG2Q9NY99 539 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 TNFSF13BQ9Y275 285 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 PCDHGC5Q9Y5F6 944 aa23.07■■□□□ 1.28
SGMS1-210ENST00000619438 SEC31AO94979 1220 aaKnown RBP23.06■■□□□ 1.28
SGMS1-210ENST00000619438 STAT1P42224 750 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 ARID5AQ03989 594 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 CAMK1Q14012 370 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 LONRF2Q1L5Z9 754 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 DCAF4L1Q3SXM0 396 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 HAUS6Q7Z4H7 955 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 RPS6KC1Q96S38 1066 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 FUT8Q9BYC5 575 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 TLR9Q9NR96 1032 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 RNF14Q9UBS8 474 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 DNAJB4Q9UDY4 337 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms