RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 MEI1Q5TIA1 1274 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 GLYCTKQ8IVS8 523 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TTC8Q8TAM2 541 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SEPT1Q8WYJ6 367 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TSPAN17Q96FV3 270 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 FBXO9Q9UK97 447 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 SALL1Q9NSC2 1324 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 KLHL33A6NCF5 533 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 UBE2Q2LH0YL09 131 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MAGEB2O15479 319 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TBC1D4O60343 1298 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 CAND2O75155 1236 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TROAPQ12815 778 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 Q4G0T1 1027 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SULF1Q8IWU6 871 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SP8Q8IXZ3 490 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 THAP11Q96EK4 314 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RMDN2Q96LZ7 410 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RBM15Q96T37 977 aaKnown RBP eCLIP3.2□□□□□ -1.9
LPP-221ENST00000618621 THTPAQ9BU02 230 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PALMDQ9NP74 551 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SPTA1P02549 2419 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ATP7BP35670 1465 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 UBE4BO95155 1302 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RCCD1A6NED2 376 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TMEM253P0C7T8 217 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ITGA8P53708 1063 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ARHGEF6Q15052 776 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SCFD1Q8WVM8 642 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 HIC2Q96JB3 615 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TMEM8AQ9HCN3 771 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 C1orf167Q5SNV9 1468 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 H0Y3Z8 333 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PRDX5P30044 214 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ALDH18A1P54886 795 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 MTMR1Q13613 665 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PRR5LQ6MZQ0 368 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ZCCHC8Q6NZY4 707 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 CRELD2Q6UXH1 353 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 MTDHQ86UE4 582 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 SLC13A5Q86YT5 568 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 CARNMT1Q8N4J0 409 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SEZ6LQ9BYH1 1024 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 DLGAP2Q9P1A6 1054 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PCSK1NQ9UHG2 260 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SLCO1B7G3V0H7 640 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 H3BRJ5 948 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SNX2O60749 519 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 FGFR4P22455 802 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MTA1Q13330 715 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 C16orf86Q6ZW13 317 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MTRQ99707 1265 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 F5P12259 2224 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RANBP1P43487 201 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TBX4P57082 545 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ELF3P78545 371 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 GRB10Q13322 594 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TKFCQ3LXA3 575 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MOXD1Q6UVY6 613 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ATP8B4Q8TF62 1192 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ATXN2LQ8WWM7 1075 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 C18orf8Q96DM3 657 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SYCE1LA8MT33 242 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 APOA4P06727 396 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 IREB2P48200 963 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 MRPS35P82673 323 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 UGP2Q16851 508 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 DALRD3Q5D0E6 543 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 RFX8Q6ZV50 586 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SETD3Q86TU7 594 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 CATSPER3Q86XQ3 398 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RDM1Q8NG50 284 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MRPL1Q9BYD6 325 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 CARD9Q9H257 536 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RGL1Q9NZL6 768 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PAK5Q9P286 719 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SYNJ2BP-COX16A0A087WUM0 186 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 WTIPA6NIX2 430 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 CAMTA2O94983 1202 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 MAPTP10636 758 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 VEGFAP15692 232 aaPredicted RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 ANGPT1Q15389 498 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 IL17AQ16552 155 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 CCNJLQ8IV13 435 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 FBXL13Q8NEE6 735 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 NPHS2Q9NP85 383 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 COX16Q9P0S2 106 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 ARHGAP20Q9P2F6 1191 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 APEX2Q9UBZ4 518 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 TOMM70O94826 608 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 SDC4P31431 198 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 NUP107P57740 925 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PDK2Q15119 407 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PUS10Q3MIT2 529 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 ZNF720Q7Z2F6 126 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 PRPF39Q86UA1 669 aaKnown RBP3.2□□□□□ -1.9
LPP-221ENST00000618621 FUKQ8N0W3 1084 aa3.2□□□□□ -1.9
LPP-221ENST00000618621 RYBPQ8N488 228 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms