RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 SEL1L2Q5TEA6 688 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 VCPIP1Q96JH7 1222 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 CXCL16Q9H2A7 254 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 SLITRK6Q9H5Y7 841 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 AGAP1Q9UPQ3 857 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 CITO14578 2027 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 CENPFP49454 3210 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 MYO1FO00160 1098 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 POLR3GO15318 223 aaPredicted RBP18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 DCAF4L1Q3SXM0 396 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 EIF2AQ9BY44 585 aaKnown RBP18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 CELF4Q9BZC1 486 aaKnown RBP18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 VIPAS39Q9H9C1 493 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 TTI1O43156 1089 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 DARSP14868 501 aaKnown RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 MMP8P22894 467 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 LACTBP83111 547 aaPredicted RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 SREBF2Q12772 1141 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 PAK2Q13177 524 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 FSCN1Q16658 493 aaKnown RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 DAB2IPQ5VWQ8 1189 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 KIF12Q96FN5 646 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 DPP3Q9NY33 737 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 SNTG2Q9NY99 539 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 HMGXB4Q9UGU5 601 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 C2CD2Q9Y426 696 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 GOLGA6L10A0A0M3HER8 536 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 LSM8O95777 96 aaKnown RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 FAM153BP0C7A2 387 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 CD19P15391 556 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 RWDD2BP57060 319 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 CDC42EP1Q00587 391 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 FAM153CQ494X1 144 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 EMBQ6PCB8 327 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 WDTC1Q8N5D0 677 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 HPDLQ96IR7 371 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 ARHGAP39Q9C0H5 1083 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 FAM153AQ9UHL3 310 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 ABT1Q9ULW3 272 aaKnown RBP18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 Q9Y3F1 56 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 HES2Q9Y543 173 aa18.44■□□□□ 0.54
PCDHGC3-205ENST00000617641 ATICP31939 592 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 RAD23BP54727 409 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 GPS2Q13227 327 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 CLUL1Q15846 466 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 PPP1R2P3Q6NXS1 205 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 TMEM35BQ8NCS4 154 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 CCDC26Q8TAB7 109 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 WHAMMQ8TF30 809 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 TMEM40Q8WWA1 233 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 TWNKQ96RR1 684 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 MRPL47Q9HD33 250 aaKnown RBP18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 ITGA11Q9UKX5 1188 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 PCDHGC3Q9UN70 934 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 SCINQ9Y6U3 715 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 TCRBV7S2A1N4TA0A589 114 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 PROSCO94903 275 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 DENND1BQ6P3S1 775 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 MAATS1Q7Z4T9 603 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 DDX42Q86XP3 938 aaKnown RBP eCLIP18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 ZDHHC14Q8IZN3 488 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 CAVIN3Q969G5 261 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 CCDC102AQ96A19 550 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 VRTNQ9H8Y1 702 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 PRDM10Q9NQV6 1147 aa18.43■□□□□ 0.54
PCDHGC3-205ENST00000617641 TRIP11Q15643 1979 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 EIF4BP23588 611 aaKnown RBP18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 SLC1A1P43005 524 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 LLGL1Q15334 1064 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 NOTUMQ6P988 496 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 ELOVL4Q9GZR5 314 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 PARVAQ9NVD7 372 aa18.42■□□□□ 0.54
PCDHGC3-205ENST00000617641 BHMG1C9JSJ3 638 aaPredicted RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 TLR3O15455 904 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 AKR1A1P14550 325 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 RBP5P82980 135 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 PURAQ00577 322 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 SNX17Q15036 470 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 SLC13A5Q86YT5 568 aaPredicted RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 PRELID2Q8N945 189 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 SLC4A11Q8NBS3 891 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 TSEN2Q8NCE0 465 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 FAXDC2Q96IV6 333 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 ZMAT2Q96NC0 199 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 TRIM51Q9BSJ1 452 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 KATNAL1Q9BW62 490 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 NXF3Q9H4D5 531 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 C17orf102A2RUQ5 167 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 CA12O43570 354 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 CILPO75339 1184 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 CALB1P05937 261 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 CDH5P33151 784 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms