RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 TULP1O00294 542 aaPredicted RBP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 PDXKO00764 312 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 RECQL4O94761 1208 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 EDN1P05305 212 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 THP07101 528 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 CCNE1P24864 410 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 STARD6P59095 220 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 SNRPFP62306 86 aaKnown RBP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 NTHL1P78549 312 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 ELAVL2Q12926 359 aaKnown RBP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 DCAF4L1Q3SXM0 396 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 PPM1LQ5SGD2 360 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 PARM1Q6UWI2 310 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 C1orf210Q8IVY1 113 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 MSTO1Q9BUK6 570 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 RPP25Q9BUL9 199 aaKnown RBP16.09■□□□□ 0.17
UBXN1-218ENST00000616865 CLIC2O15247 247 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 CCL16O15467 120 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 POU2F2P09086 479 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 SP9P0CG40 484 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 GLULP15104 373 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 RPL13P26373 211 aaKnown RBP16.08■□□□□ 0.16
UBXN1-218ENST00000616865 HOXD13P35453 343 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 CYP2J2P51589 502 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 STX17P56962 302 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 GPC5P78333 572 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
UBXN1-218ENST00000616865 EEF1DP3Q658K8 133 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 PDXDC1Q6P996 788 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 MTSS1LQ765P7 747 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 FGF13Q92913 245 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 SHDQ96IW2 340 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 ZBTB45Q96K62 511 aaPredicted RBP16.08■□□□□ 0.16
UBXN1-218ENST00000616865 DNAJC25Q9H1X3 360 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 CXCL16Q9H2A7 254 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 IKZF4Q9H2S9 585 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 PCIF1Q9H4Z3 704 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 AGPAT3Q9NRZ7 376 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 ZNF292O60281 2723 aa16.08■□□□□ 0.16
UBXN1-218ENST00000616865 NOTCH4Q99466 2003 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 FRYLO94915 3013 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 TISP43B9A030 160 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 ADAM12O43184 909 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 XYLBO75191 536 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 LRRN2O75325 713 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 MCF2P10911 925 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 GARTP22102 1010 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 LRRC63Q05C16 580 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 KYAT1Q16773 422 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 CENPPQ6IPU0 288 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
UBXN1-218ENST00000616865 SLC7A14Q8TBB6 771 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 DDX23Q9BUQ8 820 aaKnown RBP16.07■□□□□ 0.16
UBXN1-218ENST00000616865 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
UBXN1-218ENST00000616865 AGO2Q9UKV8 859 aaKnown RBP16.07■□□□□ 0.16
UBXN1-218ENST00000616865 KANSL1LA0AUZ9 987 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 KIAA0391O15091 583 aaKnown RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 OGTO15294 1046 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 TGFB1I1O43294 461 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 NR3C1P04150 777 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 PRKCQQ04759 706 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 MCL1Q07820 350 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 RAB33AQ14088 237 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 MLF2Q15773 248 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 EDRF1Q3B7T1 1238 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 SLC39A4Q6P5W5 647 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 LRSAM1Q6UWE0 723 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 KIAA2013Q8IYS2 634 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-218ENST00000616865 CDT1Q9H211 546 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 MTRRQ9UBK8 725 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 TRAF3IP3Q9Y228 551 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 FRMD4BQ9Y2L6 1034 aa16.06■□□□□ 0.16
UBXN1-218ENST00000616865 A0A0B4J269 797 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 TRIM49BA6NDI0 452 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 TMEM189-UBE2V1I3L0A0 370 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 CETN3O15182 167 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 EXOC3O60645 756 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 FGFR3P22607 806 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 PROZP22891 400 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 NR2F2P24468 414 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
UBXN1-218ENST00000616865 OSTNP61366 133 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 UVSSAQ2YD98 709 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms