RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 DRC7Q8IY82 874 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 SIMC1Q8NDZ2 872 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 TMX3Q96JJ7 454 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 C7orf25Q9BPX7 421 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 TMEM74BQ9NUR3 256 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 TMEM140Q9NV12 185 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 MKS1Q9NXB0 559 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.53□□□□□ -1.68
CBWD1-224ENST00000616803 PLA2R1Q13018 1463 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 E9PCH4 1651 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 RTEL1-TNFRSF6BF6WH68 1400 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 ERBINQ96RT1 1412 aa4.53□□□□□ -1.68
CBWD1-224ENST00000616803 INO80Q9ULG1 1556 aaPredicted RBP4.53□□□□□ -1.69
CBWD1-224ENST00000616803 MAST3O60307 1309 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 ARID4BQ4LE39 1312 aaPredicted RBP4.52□□□□□ -1.69
CBWD1-224ENST00000616803 CLSTN1O94985 981 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 AGFG2O95081 481 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 GPANK1O95872 356 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 ELFN1P0C7U0 828 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 CTXN1P60606 82 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 PRR16Q569H4 304 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 DACT2Q5SW24 774 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 TSHZ1Q6ZSZ6 1077 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 KLHL32Q96NJ5 620 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 CRAMP1Q96RY5 1269 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 FOXJ2Q9P0K8 574 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 RNF181Q9P0P0 153 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 CTTNBP2NLQ9P2B4 639 aa4.52□□□□□ -1.69
CBWD1-224ENST00000616803 ZFYVE16Q7Z3T8 1539 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 WDR7Q9Y4E6 1490 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 RNF17Q9BXT8 1623 aaKnown RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 EIF2AK4Q9P2K8 1649 aaKnown RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 E9PLN8 166 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 C1QL1O75973 258 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 ESRRBO95718 433 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 SPATA31D3P0C874 917 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 HKR1P10072 659 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 USP14P54578 494 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 SIM1P81133 766 aaPredicted RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 MC2RQ01718 297 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 KIF23Q02241 960 aaPredicted RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 SNAPC2Q13487 334 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 UTP14CQ5TAP6 766 aaKnown RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 SPATA31D4Q6ZUB0 917 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 NECAB2Q7Z6G3 386 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 FITM2Q8N6M3 262 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 TMIEQ8NEW7 156 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 CAVIN3Q969G5 261 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 MTMR8Q96EF0 704 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 CYFIP2Q96F07 1278 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 BOD1Q96IK1 185 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 VRK1Q99986 396 aaPredicted RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 VKORC1Q9BQB6 163 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 ASPSCR1Q9BZE9 553 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 RIOX1Q9H6W3 641 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 MCM8Q9UJA3 840 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 ZBTB21Q9ULJ3 1066 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 VWDEQ8N2E2 1590 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 NEURL4Q96JN8 1562 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 GPRASP1Q5JY77 1395 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 DHX29Q7Z478 1369 aaKnown RBP4.51□□□□□ -1.69
CBWD1-224ENST00000616803 USP47Q96K76 1375 aa4.51□□□□□ -1.69
CBWD1-224ENST00000616803 KIF7Q2M1P5 1343 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 CEP152O94986 1710 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 PRAG1Q86YV5 1406 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 TRAPPC8Q9Y2L5 1435 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 KLHL33A6NCF5 533 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 ZAR1LA6NP61 321 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 FAM171A2A8MVW0 826 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 XPOTO43592 962 aaKnown RBP4.5□□□□□ -1.69
CBWD1-224ENST00000616803 FOSP01100 380 aaPredicted RBP4.5□□□□□ -1.69
CBWD1-224ENST00000616803 IL12RB1P42701 662 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 TAP1Q03518 808 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 TLE1Q04724 770 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 AMOTL1Q8IY63 956 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 SUPT20HQ8NEM7 779 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 GPATCH3Q96I76 525 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 COQ10AQ96MF6 247 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 RNPEPQ9H4A4 650 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 TET3O43151 1660 aa4.5□□□□□ -1.69
CBWD1-224ENST00000616803 A2MP01023 1474 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 SPHKAPQ2M3C7 1700 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 VWC2LB2RUY7 222 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 NT5C1B-RDH14C9J2C7 533 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 MATN4O95460 622 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 LPOP22079 712 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 VAV2P52735 878 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 ZNF169Q14929 603 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 SF3B3Q15393 1217 aaKnown RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 PTPN21Q16825 1174 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 CD300EQ496F6 205 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 KHDC1Q4VXA5 237 aaKnown RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 EFCAB2Q5VUJ9 269 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 DPY19L2P1Q6NXN4 242 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 FBXO42Q6P3S6 717 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 FAM180AQ6UWF9 173 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms