RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 RBAK-RBAKDNI3L0D1 243 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 CES2O00748 559 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 PROSCO94903 275 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 CXCL8P10145 99 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 MOB2Q70IA6 237 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 WDR49Q8IV35 697 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 SPATA31C2B4DYI2 1134 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 F5H423 210 aaPredicted RBP13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 PEX10O60683 326 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 STAMBPO95630 424 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 AGTP01019 485 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 RARBP10826 455 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 ROR1Q01973 937 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 NEU2Q9Y3R4 380 aa13.92□□□□□ -0.18
PPP4R3B-206ENST00000616407 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 CYP2C8P10632 490 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 RASSF2P50749 326 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 AGBL2Q5U5Z8 902 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 FAM71AQ8IYT1 594 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 CPB2Q96IY4 423 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 LCA5LO95447 670 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 CHN1P15882 459 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 RAP1GAPP47736 663 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 NOVP48745 357 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 SLC26A2P50443 739 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 ITKQ08881 620 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 SPARCL1Q14515 664 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 HIF1AQ16665 826 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 DGKDQ16760 1214 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 GLRA4Q5JXX5 417 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 SHC3Q92529 594 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 GDF3Q9NR23 364 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 MYH7P12883 1935 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 TNPO2O14787 897 aaKnown RBP13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 NPTXRO95502 500 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 PPATQ06203 517 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 MDM1Q8TC05 714 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 STMN2Q93045 179 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
PPP4R3B-206ENST00000616407 CREB3O43889 395 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 SPAG7O75391 227 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 CENPCQ03188 943 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 TADA2BQ86TJ2 420 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 COPS5Q92905 334 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 UBR2Q8IWV8 1755 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 IQANK1A0A1B0GTG1 560 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 MAPK13O15264 365 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 MAGEA9P43362 315 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 STAT4Q14765 748 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 HIBCHQ6NVY1 386 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 ZNF473Q8WTR7 871 aaKnown RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 BTNL10A8MVZ5 291 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 H3BRB1 525 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 GJB6O95452 261 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 C6orf222P0C671 652 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 RARAP10276 462 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 LRRC31Q6UY01 552 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 TUT1Q9H6E5 874 aaKnown RBP13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
PPP4R3B-206ENST00000616407 NFASCO94856 1347 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 OPLAHO14841 1288 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 PSTPIP1O43586 416 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDH16O75309 829 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF286BP0CG31 522 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 RBP3P10745 1247 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 HSPA9P38646 679 aaKnown RBP13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 TREML2Q5T2D2 321 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 SRLQ86TD4 932 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 PPM1NQ8N819 430 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 REPS2Q8NFH8 660 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 SEMA4DQ92854 862 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 TPX2Q9ULW0 747 aaKnown RBP13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.19
PPP4R3B-206ENST00000616407 IRX4P78413 519 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 NR1H3Q13133 447 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 NME3Q13232 169 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms