RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 C2CD2LO14523 706 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FAM86B2P0C5J1 330 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ALAS1P13196 640 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 GYS1P13807 737 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ANPEPP15144 967 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NSFP46459 744 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 ATXN3P54252 364 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 MFAP3P55082 362 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 OCRLQ01968 901 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ITPK1Q13572 414 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ZYXQ15942 572 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 WDR72Q3MJ13 1102 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 TNFAIP8L3Q5GJ75 292 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 TMEM63BQ5T3F8 832 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 RIPOR1Q6ZS17 1223 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SCUBE1Q8IWY4 988 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ARHGAP18Q8N392 663 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 NMUR2Q9GZQ4 415 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 TOPORSQ9NS56 1045 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 DNAAF2Q9NVR5 837 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 PACSIN3Q9UKS6 424 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 AGTPBP1Q9UPW5 1226 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 TJP1Q07157 1748 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 LOC100653049A0A140TA62 436 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FSCN2O14926 492 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 MSH4O15457 936 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 DNAJC6O75061 913 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ATP6V1G1O75348 118 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 KRT34O76011 436 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 PDE5AO76074 875 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 KRT1P04264 644 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FGFR1P11362 822 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 DESP17661 470 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 HOXA7P31268 230 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 CACNB3P54284 484 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ARL4CP56559 192 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 GTF2IP78347 998 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 BASP1P80723 227 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 PTK6Q13882 451 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 KIF22Q14807 665 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NFIXQ14938 502 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SLFN13Q68D06 897 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 PRPF39Q86UA1 669 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 APLFQ8IW19 511 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 NME8Q8N427 588 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 RAB3IL1Q8TBN0 382 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 C7orf43Q8WVR3 580 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FAM136AQ96C01 138 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 DTNBP1Q96EV8 351 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SPATA16Q9BXB7 569 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 GPR88Q9GZN0 384 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 RANBP17Q9H2T7 1088 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 MMADHCQ9H3L0 296 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 EBF3Q9H4W6 596 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 KRT82Q9NSB4 513 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 PSMC3IPQ9P2W1 217 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 STX18Q9P2W9 335 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 SAE1Q9UBE0 346 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 GTF3C4Q9UKN8 822 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 DNPEPQ9ULA0 475 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 INHBAP08476 426 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 HARSP12081 509 aaKnown RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 CYP11B1P15538 503 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SIX1Q15475 284 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 DDB1Q16531 1140 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FOXR2Q6PJQ5 311 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SATL1Q86VE3 508 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 MAP7D3Q8IWC1 876 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ZNF713Q8N859 430 aaPredicted RBP7.03□□□□□ -1.28
LMO3-235ENST00000616247 FBXO27Q8NI29 283 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 PTPRN2Q92932 1015 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NT5C1BQ96P26 610 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ECSITQ9BQ95 431 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 TMEM121Q9BTD3 319 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SAR1AQ9NR31 198 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 CREBZFQ9NS37 354 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 RAB20Q9NX57 234 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 ATXN10Q9UBB4 475 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NENFQ9UMX5 172 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 NUMBLQ9Y6R0 609 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 KCPQ6ZWJ8 1503 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SPATA31D3P0C874 917 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 HSPA1LP34931 641 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 HIF1AQ16665 826 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 DCUN1D2Q6PH85 259 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 IYDQ6PHW0 289 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 RHBDF2Q6PJF5 856 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SPATA31D4Q6ZUB0 917 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 MARK2Q7KZI7 788 aaKnown RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 ZNF720Q7Z2F6 126 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 MYLK4Q86YV6 388 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 GSTCDQ8NEC7 633 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms