RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 PTPRJQ12913 1337 aa27.32■■□□□ 1.96
SURF1-205ENST00000615505 MTCL1Q9Y4B5 1905 aaKnown RBP27.31■■□□□ 1.96
SURF1-205ENST00000615505 OR6C75A6NL08 312 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 ABLIM3O94929 683 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 PAPLNO95428 1278 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 CYP11A1P05108 521 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 HNRNPA1P09651 372 aaKnown RBP eCLIP27.31■■□□□ 1.96
SURF1-205ENST00000615505 RPL13P26373 211 aaKnown RBP27.31■■□□□ 1.96
SURF1-205ENST00000615505 MYO1EQ12965 1108 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 NFIL3Q16649 462 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 SMYD4Q8IYR2 804 aaPredicted RBP27.31■■□□□ 1.96
SURF1-205ENST00000615505 CXorf38Q8TB03 319 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 SMG7Q92540 1137 aaKnown RBP27.31■■□□□ 1.96
SURF1-205ENST00000615505 BORCS6Q96GS4 357 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 FAM84AQ96KN4 292 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 PRKD2Q9BZL6 878 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 SIX4Q9UIU6 781 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 NR2E1Q9Y466 385 aa27.31■■□□□ 1.96
SURF1-205ENST00000615505 SCN1AP35498 2009 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 WDR27A2RRH5 827 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 CPB1P15086 417 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 ATF2P15336 505 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 BFSP1Q12934 665 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 CEP135Q66GS9 1140 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 TRAPPC11Q7Z392 1133 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 SLC7A14Q8TBB6 771 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 MAFFQ9ULX9 164 aa27.3■■□□□ 1.96
SURF1-205ENST00000615505 LOC730098B7Z3J9 87 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 NR2F2P24468 414 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 HOXA9P31269 272 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 COBLL1Q53SF7 1204 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 THEM5Q8N1Q8 247 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 ZNF707Q96C28 371 aaPredicted RBP27.29■■□□□ 1.96
SURF1-205ENST00000615505 TSHZ2Q9NRE2 1034 aa27.29■■□□□ 1.96
SURF1-205ENST00000615505 BDP1A6H8Y1 2624 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 PRRG1O14668 218 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 HUS1O60921 280 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 PRCPP42785 496 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 CASP4P49662 377 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 AP3M2P53677 418 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 CLEC17AQ6ZS10 378 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 FEZF2Q8TBJ5 459 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 PARD3BQ8TEW8 1205 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 GDAP2Q9NXN4 497 aa27.28■■□□□ 1.96
SURF1-205ENST00000615505 AFF4Q9UHB7 1163 aaKnown RBP27.28■■□□□ 1.96
SURF1-205ENST00000615505 MAPK13O15264 365 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 XYLBO75191 536 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 ADAM9Q13443 819 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 EDRF1Q3B7T1 1238 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 WSCD1Q658N2 575 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 TCEAL8Q8IYN2 117 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 HPDLQ96IR7 371 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 CYP4F11Q9HBI6 524 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 WDR6Q9NNW5 1121 aaKnown RBP27.27■■□□□ 1.96
SURF1-205ENST00000615505 SNX9Q9Y5X1 595 aa27.27■■□□□ 1.96
SURF1-205ENST00000615505 ADCY1Q08828 1119 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 STIM1Q13586 685 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 ZCWPW2Q504Y3 356 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 TMC2Q8TDI7 906 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 ZNF516Q92618 1163 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 TSG101Q99816 390 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 GZF1Q9H116 711 aaPredicted RBP27.26■■□□□ 1.95
SURF1-205ENST00000615505 MAN1B1Q9UKM7 699 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 USTQ9Y2C2 406 aa27.26■■□□□ 1.95
SURF1-205ENST00000615505 CCL16O15467 120 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 PHACTR2O75167 634 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 POU2F2P09086 479 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 SP100P23497 879 aaPredicted RBP27.25■■□□□ 1.95
SURF1-205ENST00000615505 PSMC2P35998 433 aaKnown RBP27.25■■□□□ 1.95
SURF1-205ENST00000615505 CLDN10P78369 228 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 GPR17Q13304 367 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 TRPC3Q13507 836 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 SCARA3Q6AZY7 606 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 CENPPQ6IPU0 288 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 RNF19BQ6ZMZ0 732 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 ADSSL1Q8N142 457 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 TMEM86AQ8N2M4 240 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 PLEKHO2Q8TD55 490 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 POLIQ9UNA4 740 aa27.25■■□□□ 1.95
SURF1-205ENST00000615505 CLUHO75153 1309 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 LRRIQ3A6PVS8 624 aaPredicted RBP27.24■■□□□ 1.95
SURF1-205ENST00000615505 LRG1P02750 347 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 OR4Q2P0C623 313 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 PPP1R2P41236 205 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 BIRC3Q13489 604 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 ISM2Q6H9L7 571 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 INTS8Q75QN2 995 aaKnown RBP27.24■■□□□ 1.95
SURF1-205ENST00000615505 OTOP3Q7RTS5 596 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 RNF135Q8IUD6 432 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 PDCL2Q8N4E4 241 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 TOP6BLQ8N6T0 577 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 ACSF2Q96CM8 615 aaPredicted RBP27.24■■□□□ 1.95
SURF1-205ENST00000615505 GBP4Q96PP9 640 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 L1RE1Q9UN81 338 aa27.24■■□□□ 1.95
SURF1-205ENST00000615505 CETN3O15182 167 aa27.23■■□□□ 1.95
SURF1-205ENST00000615505 AKAP3O75969 853 aa27.23■■□□□ 1.95
SURF1-205ENST00000615505 SEC24AO95486 1093 aa27.23■■□□□ 1.95
SURF1-205ENST00000615505 CST3P01034 146 aaPredicted RBP27.23■■□□□ 1.95
SURF1-205ENST00000615505 KRT13P13646 458 aa27.23■■□□□ 1.95
SURF1-205ENST00000615505 DPH6Q7L8W6 267 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms