RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SMG7Q92540 1137 aaKnown RBP6.15□□□□□ -1.42
CPNE3-208ENST00000614678 KCNN1Q92952 543 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 CYP4F11Q9HBI6 524 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 FBXW11Q9UKB1 542 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 MAN1B1Q9UKM7 699 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 GTF3C4Q9UKN8 822 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 UBQLN1Q9UMX0 589 aaKnown RBP6.15□□□□□ -1.42
CPNE3-208ENST00000614678 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 MYBPHLA2RUH7 354 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 M0QZQ0 153 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 SLC26A4O43511 780 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 EXOC3O60645 756 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 NR3C1P04150 777 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 SLC39A12Q504Y0 691 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 ARID3AQ99856 593 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 EMILIN2Q9BXX0 1053 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 PVALEFA0A1B0GWK0 134 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 C19orf67A6NJJ6 358 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 KPNA7A9QM74 516 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 LOC730098B7Z3J9 87 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 TMEM189-UBE2V1I3L0A0 370 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 CLDN5O00501 218 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 CPB1P15086 417 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 TNNI1P19237 187 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 GARTP22102 1010 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 GCLMP48507 274 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 PGFP49763 221 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 AMPD3Q01432 767 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 YWHAHQ04917 246 aaPredicted RBP6.15□□□□□ -1.43
CPNE3-208ENST00000614678 BFSP1Q12934 665 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 ZCWPW2Q504Y3 356 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 PARM1Q6UWI2 310 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.15□□□□□ -1.43
CPNE3-208ENST00000614678 TRAPPC11Q7Z392 1133 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 GPR149Q86SP6 731 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 PLA2G2FQ9BZM2 168 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 CUEDC2Q9H467 287 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 SMYD3Q9H7B4 428 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 PLEKHA5Q9HAU0 1116 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF334Q9HCZ1 680 aaPredicted RBP6.15□□□□□ -1.43
CPNE3-208ENST00000614678 INTS13Q9NVM9 706 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 DMAC2Q9NW81 257 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 NXF1Q9UBU9 619 aaKnown RBP6.15□□□□□ -1.43
CPNE3-208ENST00000614678 CACNA1IQ9P0X4 2223 aa6.15□□□□□ -1.43
CPNE3-208ENST00000614678 ATF6P18850 670 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CD72P21854 359 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CYP2F1P24903 491 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TWF1Q12792 350 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 DDR2Q16832 855 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 BMT2Q1RMZ1 405 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 OVOS1Q6IE37 1185 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SLC8B1Q6J4K2 584 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 HFE2Q6ZVN8 426 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 XXYLT1Q8NBI6 393 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 RIN3Q8TB24 985 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CASP10Q92851 521 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SEMA4DQ92854 862 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CORO1BQ9BR76 489 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PHF7Q9BWX1 381 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 XYLT2Q9H1B5 865 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 APOBEC3GQ9HC16 384 aaKnown RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 GOLGA6L4A6NEF3 574 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF233A6NK53 670 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 EIF3DO15371 548 aaKnown RBP eCLIP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 MOSPD3O75425 235 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ABLIM3O94929 683 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 NR2F2P24468 414 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ANP32AP39687 249 aaKnown RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 RAB33AQ14088 237 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SLFN12LQ6IEE8 588 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TTC16Q8NEE8 873 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF461Q8TAF7 563 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 MCRS1Q96EZ8 462 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 LRRC3BQ96PB8 259 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TWNKQ96RR1 684 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TMEM206Q9H813 350 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SLC38A7Q9NVC3 462 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 RNF216Q9NWF9 866 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CHMP5Q9NZZ3 219 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 GPR179Q6PRD1 2367 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 MTMR11A4FU01 709 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ZMYND10O75800 440 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CEBPBP17676 345 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 WDR72Q3MJ13 1102 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CBWD6Q4V339 395 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CBWD3Q5JTY5 395 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CBWD5Q5RIA9 395 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 C12orf29Q8N999 325 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 BEST2Q8NFU1 509 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TAS1R2Q8TE23 839 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 RSPRY1Q96DX4 576 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ASB7Q9H672 318 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 LMBRD1Q9NUN5 540 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ABI2Q9NYB9 513 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ATP6V1DQ9Y5K8 247 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms