RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CENPCQ03188 943 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 METTL13Q8N6R0 699 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 MYLK2Q9H1R3 596 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 SELENONQ9NZV5 590 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 CDK17Q00537 523 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 OR6Y1Q8NGX8 325 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 PRCCQ92733 491 aaPredicted RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 IMPAD1Q9NX62 359 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 ABCA8O94911 1581 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 CDC26Q8NHZ8 85 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 FNIP1Q8TF40 1166 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 IP6K1Q92551 441 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 OTULINQ96BN8 352 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 TRIM39Q9HCM9 518 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 POLA2Q14181 598 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 C17orf80Q9BSJ5 609 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 CES2O00748 559 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 CDO1Q16878 200 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 TUBA3EQ6PEY2 450 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 ZBTB49Q6ZSB9 765 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 TMC4Q7Z404 712 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 NARS2Q96I59 477 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 UVRAGQ9P2Y5 699 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 SNX13Q9Y5W8 968 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 PSMG1O95456 288 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 ANKRD40Q6AI12 368 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 RBM44Q6ZP01 1051 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 AGPAT1Q99943 283 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 SLC52A2Q9HAB3 445 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 MYO1GB0I1T2 1018 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 APOL1O14791 398 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 CYTH3O43739 400 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 SNX17Q15036 470 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 TSC22D1Q15714 1073 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 APBB2Q92870 758 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 ZC3H7BQ9UGR2 993 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 CNOT7Q9UIV1 285 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 FAM32AQ9Y421 112 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 APRTP07741 180 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 SERPINB5P36952 375 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 SVOPQ8N4V2 548 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 BTBD3Q9Y2F9 522 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 AK5Q9Y6K8 562 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 RGS20O76081 388 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 EIF3EP60228 445 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 PLIN5Q00G26 463 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 ITGA9Q13797 1035 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 NCF4Q15080 339 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 LEMD3Q9Y2U8 911 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 MAPRE1Q15691 268 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 TRIM65Q6PJ69 517 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 KRT28Q7Z3Y7 464 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 CDKL3Q8IVW4 592 aaPredicted RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 B3GALT6Q96L58 329 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 ZC3H13Q5T200 1668 aaKnown RBP14.37□□□□□ -0.11
CHD1-212ENST00000614616 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHD1-212ENST00000614616 CYP4A22Q5TCH4 519 aa14.37□□□□□ -0.11
CHD1-212ENST00000614616 NR1H2P55055 460 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 TRAF2Q12933 501 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 FOXD4Q12950 439 aaPredicted RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 CLDN3O15551 220 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 PGM3O95394 542 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 EXOSC4Q9NPD3 245 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 CENPXA8MT69 81 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 RNF135Q8IUD6 432 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 SEPT9Q9UHD8 586 aaPredicted RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 TELO2Q9Y4R8 837 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 MAP3K13O43283 966 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 DDX5P17844 614 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 AARS2Q5JTZ9 985 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 MIS18BP1Q6P0N0 1132 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 GLG1Q92896 1179 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 ILKAPQ9H0C8 392 aaPredicted RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 KCNN4O15554 427 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 ZBED4O75132 1171 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 MYBL2P10244 700 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 VAMP7P51809 220 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 RAB15P59190 212 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 PURAQ00577 322 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 TSPAN14Q8NG11 270 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 BHMTQ93088 406 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
CHD1-212ENST00000614616 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
CHD1-212ENST00000614616 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms