RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 POLR2BP30876 1174 aaKnown RBP13.83□□□□□ -0.2
CCL4-201ENST00000613947 GLUD2P49448 558 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 CLDN10P78369 228 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 DSG1Q02413 1049 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
CCL4-201ENST00000613947 ELF2Q15723 593 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 INTS8Q75QN2 995 aaKnown RBP13.83□□□□□ -0.2
CCL4-201ENST00000613947 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 MAFAQ8NHW3 353 aaPredicted RBP13.83□□□□□ -0.2
CCL4-201ENST00000613947 BORCS6Q96GS4 357 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 MRPL17Q9NRX2 175 aaKnown RBP13.83□□□□□ -0.2
CCL4-201ENST00000613947 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 AGAP1Q9UPQ3 857 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 IRAK3Q9Y616 596 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 VWA8A3KMH1 1905 aa13.83□□□□□ -0.2
CCL4-201ENST00000613947 URODP06132 367 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 KRT19P08727 400 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 FGFR3P22607 806 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 TKTP29401 623 aaKnown RBP13.82□□□□□ -0.2
CCL4-201ENST00000613947 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCL4-201ENST00000613947 VAMP7P51809 220 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 TPM4P67936 248 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 RIN2Q8WYP3 895 aaPredicted RBP13.82□□□□□ -0.2
CCL4-201ENST00000613947 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 ARGLU1Q9NWB6 273 aaPredicted RBP13.82□□□□□ -0.2
CCL4-201ENST00000613947 ZNF446Q9NWS9 450 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.82□□□□□ -0.2
CCL4-201ENST00000613947 RWDD2AQ9UIY3 292 aa13.82□□□□□ -0.2
CCL4-201ENST00000613947 C5orf42Q9H799 3197 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 SLC16A3O15427 465 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 NRDCO43847 1150 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 CST3P01034 146 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 TRIM49P0CI25 452 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 TRIM49CP0CI26 452 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 KRT13P13646 458 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 NRIP1P48552 1158 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 RBP5P82980 135 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 HYAL1Q12794 435 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 BFSP1Q12934 665 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 PRSS55Q6UWB4 352 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 TLE6Q9H808 572 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 M0QZQ0 153 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 IKBKBO14920 756 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 ZRANB2O95218 330 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCL4-201ENST00000613947 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 TAF6P49848 677 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 TDRD10Q5VZ19 366 aaKnown RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 USP37Q86T82 979 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 TXLNBQ8N3L3 684 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 SENP8Q96LD8 212 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 SSX2IPQ9Y2D8 614 aa13.81□□□□□ -0.2
CCL4-201ENST00000613947 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 V9GYY5 206 aaPredicted RBP13.81□□□□□ -0.2
CCL4-201ENST00000613947 BECN2A8MW95 431 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 KPNA7A9QM74 516 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 SYN3O14994 580 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 TEX28O15482 410 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 RPL17P18621 184 aaKnown RBP13.8□□□□□ -0.2
CCL4-201ENST00000613947 AP3M2P53677 418 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 PPP3CAQ08209 521 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 SKIV2LQ15477 1246 aaKnown RBP13.8□□□□□ -0.2
CCL4-201ENST00000613947 DUSP6Q16828 381 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 SV2AQ7L0J3 742 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 RXFP1Q9HBX9 757 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
CCL4-201ENST00000613947 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
CCL4-201ENST00000613947 CLASP2O75122 1294 aaKnown RBP13.79□□□□□ -0.2
CCL4-201ENST00000613947 ERCC5P28715 1186 aaPredicted RBP13.79□□□□□ -0.2
CCL4-201ENST00000613947 PNPLA4P41247 253 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 GCLMP48507 274 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 ENPEPQ07075 957 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 BIRC3Q13489 604 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 ZACNQ401N2 412 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 SV2CQ496J9 727 aa13.79□□□□□ -0.2
CCL4-201ENST00000613947 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms