RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ZACNQ401N2 412 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 WDR44Q5JSH3 913 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 PHLDB2Q86SQ0 1253 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CPNE8Q86YQ8 564 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 NR2E1Q9Y466 385 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 VNN1O95497 513 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ABCD1P33897 745 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 RIPK1Q13546 671 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 LRRC14Q15048 493 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 TAF11Q15544 211 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CCDC38Q502W7 563 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 SLFN12LQ6IEE8 588 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 OR5B17Q8NGF7 314 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CCHCR1Q8TD31 782 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 DDX1Q92499 740 aaKnown RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ALG3Q92685 438 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CORO1CQ9ULV4 474 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CLDN3O15551 220 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 PECAM1P16284 738 aaPredicted RBP17.5■□□□□ 0.39
CNOT3-208ENST00000613073 MARCKSL1P49006 195 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 LAMTOR4Q0VGL1 99 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 UBAP2Q5T6F2 1119 aaKnown RBP17.5■□□□□ 0.39
CNOT3-208ENST00000613073 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
CNOT3-208ENST00000613073 KRT35Q92764 455 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 ZNF653Q96CK0 615 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 MAP3K13O43283 966 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 GSTA1P08263 222 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 RARAP10276 462 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 GZMAP12544 262 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
CNOT3-208ENST00000613073 GCNT1Q02742 428 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 RHPN2Q8IUC4 686 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 RASGEF1CQ8N431 466 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 NUP85Q9BW27 656 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 CNOT10Q9H9A5 744 aaKnown RBP17.5■□□□□ 0.39
CNOT3-208ENST00000613073 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
CNOT3-208ENST00000613073 ANKRD33BA6NCL7 494 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 CFAP73A6NFT4 308 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 ZBTB42B2RXF5 422 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 PIGRP01833 764 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 PDHA1P08559 390 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 RAB27AP51159 221 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 CLDN10P78369 228 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 BLMHQ13867 455 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 PIGWQ7Z7B1 504 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 CDR2LQ86X02 465 aaPredicted RBP17.49■□□□□ 0.39
CNOT3-208ENST00000613073 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
CNOT3-208ENST00000613073 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 NLRP4Q96MN2 994 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 TMEM134Q9H6X4 195 aa17.49■□□□□ 0.39
CNOT3-208ENST00000613073 APOBEC3GQ9HC16 384 aaKnown RBP17.49■□□□□ 0.39
CNOT3-208ENST00000613073 ZNFX1Q9P2E3 1918 aaKnown RBP17.48■□□□□ 0.39
CNOT3-208ENST00000613073 COMTP21964 271 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 IGBP1P78318 339 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 SNAPC2Q13487 334 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 CCDC62Q6P9F0 684 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ZNF564Q8TBZ8 553 aaPredicted RBP17.48■□□□□ 0.39
CNOT3-208ENST00000613073 CPA5Q8WXQ8 436 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 TLCD1Q96CP7 247 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 FAM167AQ96KS9 214 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ADGRA2Q96PE1 1338 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 MSCO60682 206 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 SMIM24O75264 130 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
CNOT3-208ENST00000613073 GNAT1P11488 350 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ITIH4Q14624 930 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 MROH8Q9H579 483 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 PIDD1Q9HB75 910 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 CNTNAP2Q9UHC6 1331 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
CNOT3-208ENST00000613073 DPPA5A6NC42 116 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 CCND1P24385 295 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 OSTNP61366 133 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 IER5Q5VY09 327 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
CNOT3-208ENST00000613073 LLGL2Q6P1M3 1020 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 FMO2Q99518 471 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 ADAM7Q9H2U9 754 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 ASAP2O43150 1006 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 ZC3H11AO75152 810 aaKnown RBP eCLIP17.47■□□□□ 0.39
CNOT3-208ENST00000613073 CFHP08603 1231 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 TUBP50607 506 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms