RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ALDH1A3P47895 512 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 TSPY1Q01534 308 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 SMARCB1Q12824 385 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 PABPC1LQ4VXU2 614 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CYP4A22Q5TCH4 519 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 KRBA2Q6ZNG9 492 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 TCEAL8Q8IYN2 117 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 GRAMD1CQ8IYS0 662 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 DCP1BQ8IZD4 617 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 LRFN3Q9BTN0 628 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 IKZF4Q9H2S9 585 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 TIMM13Q9Y5L4 95 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 TTC28Q96AY4 2481 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 VCANP13611 3396 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 CLIC2O15247 247 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 PHACTR2O75167 634 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 PAPLNO95428 1278 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 CYP11A1P05108 521 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
CBWD3-208ENST00000612050 RFX1P22670 979 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 EPHB3P54753 998 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 MYL7Q01449 175 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 BFSP1Q12934 665 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 TDGQ13569 410 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 TAF12Q16514 161 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 TRIM67Q6ZTA4 783 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 MTSS1LQ765P7 747 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 PDZD4Q76G19 769 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-208ENST00000612050 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
CBWD3-208ENST00000612050 MFSD1Q9H3U5 465 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-208ENST00000612050 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 MRPS23Q9Y3D9 190 aaKnown RBP13.29□□□□□ -0.28
CBWD3-208ENST00000612050 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
CBWD3-208ENST00000612050 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 M0R296 226 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 SMC2O95347 1197 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-208ENST00000612050 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
CBWD3-208ENST00000612050 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
CBWD3-208ENST00000612050 AP3M2P53677 418 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 EHHADHQ08426 723 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 GPR17Q13304 367 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 TRPC3Q13507 836 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-208ENST00000612050 CBWD2Q8IUF1 395 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 MTMR12Q9C0I1 747 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 EPS15L1Q9UBC2 864 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 FBXL21Q9UKT6 434 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
CBWD3-208ENST00000612050 PDXKO00764 312 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 PPEF2O14830 753 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 FGF19O95750 216 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 LAMP2P13473 410 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
CBWD3-208ENST00000612050 COL9A1P20849 921 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 TWF1Q12792 350 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 PSMD6Q15008 389 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 ITIH5Q86UX2 942 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 C1orf127Q8N9H9 656 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 CORO1BQ9BR76 489 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 ASAH2Q9NR71 780 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 ASB3Q9Y575 518 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.29
CBWD3-208ENST00000612050 SPTBN5Q9NRC6 3674 aaKnown RBP13.26□□□□□ -0.29
CBWD3-208ENST00000612050 TGFB1I1O43294 461 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 KLRC4O43908 158 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
CBWD3-208ENST00000612050 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 ASGR2P07307 311 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 RHOP08100 348 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms