RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
CBWD1-220ENST00000612045 TUBB2AQ13885 445 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 TRIM72Q6ZMU5 477 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 SLC35G2Q8TBE7 412 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 LPPQ93052 612 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
CBWD1-220ENST00000612045 MMS19Q96T76 1030 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 ADAM2Q99965 735 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 TUBB2BQ9BVA1 445 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 FAM124BQ9H5Z6 455 aaPredicted RBP13.13□□□□□ -0.31
CBWD1-220ENST00000612045 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 GIT1Q9Y2X7 761 aa13.13□□□□□ -0.31
CBWD1-220ENST00000612045 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 CILPO75339 1184 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
CBWD1-220ENST00000612045 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
CBWD1-220ENST00000612045 MLH1P40692 756 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 RAD23BP54727 409 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 CENPCQ03188 943 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 INCA1Q0VD86 236 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 GSTCDQ8NEC7 633 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 GAD1Q99259 594 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 GOLGA2P5Q9HBQ8 144 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
CBWD1-220ENST00000612045 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
CBWD1-220ENST00000612045 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 ARL5CA6NH57 179 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 UQCRHP07919 91 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 PAEPP09466 180 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
CBWD1-220ENST00000612045 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
CBWD1-220ENST00000612045 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 PASD1Q8IV76 773 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 RHOT2Q8IXI1 618 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SLC4A11Q8NBS3 891 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 ZSWIM1Q9BR11 485 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 ELOVL4Q9GZR5 314 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 CYP1A2P05177 515 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SELPP16109 830 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 LRPAP1P30533 357 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 PNPLA4P41247 253 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
CBWD1-220ENST00000612045 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
CBWD1-220ENST00000612045 NOMO3P69849 1222 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 BFSP2Q13515 415 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 ZNF560Q96MR9 790 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SLC38A7Q9NVC3 462 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 GTF3C4Q9UKN8 822 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 PCDHGC3Q9UN70 934 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 COG5Q9UP83 839 aa13.11□□□□□ -0.31
CBWD1-220ENST00000612045 SPTLC1O15269 473 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-220ENST00000612045 NCK2O43639 380 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
CBWD1-220ENST00000612045 FTCDO95954 541 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 THP07101 528 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 SKIP12755 728 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 CD19P15391 556 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 TAF6P49848 677 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 NDST1P52848 882 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
CBWD1-220ENST00000612045 ORC1Q13415 861 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 CTU1Q7Z7A3 348 aaKnown RBP13.1□□□□□ -0.31
CBWD1-220ENST00000612045 SLFN11Q7Z7L1 901 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 PGBD4Q96DM1 585 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 CARD6Q9BX69 1037 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
CBWD1-220ENST00000612045 KPNA7A9QM74 516 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms