RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 EPS8L1Q8TE68 723 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 PABPC3Q9H361 631 aaKnown RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 KCNN4O15554 427 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 CDH16O75309 829 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 FNTAP49354 379 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 STAT4Q14765 748 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 ZCWPW2Q504Y3 356 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 AADACL2Q6P093 401 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 OPTNQ96CV9 577 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 ZNF560Q96MR9 790 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 ASCC2Q9H1I8 757 aaPredicted RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 NPTXRO95502 500 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 APRTP07741 180 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 KYAT1Q16773 422 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 KLHL38Q2WGJ6 581 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 C4orf33Q8N1A6 199 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 SPATA18Q8TC71 538 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 MAML1Q92585 1016 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 CPB2Q96IY4 423 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 ALG13Q9NP73 1137 aaKnown RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 RAB6BQ9NRW1 208 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 COL20A1Q9P218 1284 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 DCTN4Q9UJW0 460 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 NOL4O94818 638 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
TCF3-220ENST00000611869 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 CATSPERGQ6ZRH7 1159 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 ANO5Q75V66 913 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 EMC1Q8N766 993 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 TTYH3Q9C0H2 523 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
TCF3-220ENST00000611869 AP1B1Q10567 949 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 NR1H3Q13133 447 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 AGBL2Q5U5Z8 902 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 MCOLN2Q8IZK6 566 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 ZNF606Q8WXB4 792 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 MAP2K7O14733 419 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 GJB6O95452 261 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 TGFB3P10600 412 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 CETPP11597 493 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 HSPA9P38646 679 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 PTGER2P43116 358 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 MAGEA4P43358 317 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 PTENP60484 403 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 CFAP61Q8NHU2 1237 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 TPX2Q9ULW0 747 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 PPP2R3BQ9Y5P8 575 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 APOL1O14791 398 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 GIPC1O14908 333 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 ADCY3O60266 1144 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 INSRRP14616 1297 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 TMPRSS15P98073 1019 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 GCNT1Q02742 428 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 C11orf63Q6NUN7 778 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 AENQ8WTP8 325 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 SIK2Q9H0K1 926 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 IRF6O14896 467 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 PROSCO94903 275 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 HSD17B4P51659 736 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 MARSP56192 900 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 JAG1P78504 1218 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 SEPT6Q14141 434 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 RRP1BQ14684 758 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 EPS8L3Q8TE67 593 aaKnown RBP13.84□□□□□ -0.19
TCF3-220ENST00000611869 CCT6BQ92526 530 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 CAVIN3Q969G5 261 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 TRABDQ9H4I3 376 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 MROH8Q9H579 483 aa13.84□□□□□ -0.19
TCF3-220ENST00000611869 ZNF286BP0CG31 522 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 EPHX2P34913 555 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 PPATQ06203 517 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 DGKDQ16760 1214 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 ZNF662Q6ZS27 426 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 GPC2Q8N158 579 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.19
TCF3-220ENST00000611869 GPRC5DQ9NZD1 345 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms