RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 FAM117BQ6P1L5 589 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 PDXDC1Q6P996 788 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 FMNL3Q8IVF7 1028 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 UBR7Q8N806 425 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 TC2NQ8N9U0 490 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 C3orf58Q8NDZ4 430 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 SP7Q8TDD2 431 aaPredicted RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 SHC3Q92529 594 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 YME1L1Q96TA2 773 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 TTYH1Q9H313 450 aaPredicted RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 CACNG4Q9UBN1 327 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 NXF1Q9UBU9 619 aaKnown RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 CNTN6Q9UQ52 1028 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 M0QZQ0 153 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 FOXN3O00409 490 aaPredicted RBP17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 TACC1O75410 805 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 IGFBP6P24592 240 aaPredicted RBP17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 STAT1P42224 750 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 SLC11A1P49279 550 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 BCAR1P56945 870 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 YWHAEP62258 255 aaKnown RBP17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 TOP6BLQ8N6T0 577 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 SPAG5Q96R06 1193 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 DNAJC7Q99615 494 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 SNX9Q9Y5X1 595 aa17.1■□□□□ 0.33
CLTCL1-207ENST00000611723 F8VZ95 297 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 CYB561D2O14569 222 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 KIF4AO95239 1232 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 SOX5P35711 763 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 RAPGEF1Q13905 1077 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 ARHGAP44Q17R89 818 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 SOWAHAQ2M3V2 549 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 FAM71AQ8IYT1 594 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 RABGGTAQ92696 567 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 SUSD3Q96L08 255 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 SENP8Q96LD8 212 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 PANX2Q96RD6 677 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 ARID3AQ99856 593 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 MARCH5Q9NX47 278 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 HCSTQ9UBK5 93 aa17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
CLTCL1-207ENST00000611723 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 LRRC53A6NM62 1247 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 TADA2AO75478 443 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 EFEMP2O95967 443 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 CYP11A1P05108 521 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 WEE2P0C1S8 567 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 LAG3P18627 525 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 INCA1Q0VD86 236 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 DSTYKQ6XUX3 929 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 TMEM86AQ8N2M4 240 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 CLP1Q92989 425 aaKnown RBP17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 MMS19Q96T76 1030 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 SDCBP2Q9H190 292 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 CISHQ9NSE2 258 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 ABHD10Q9NUJ1 306 aa17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 PRG3Q9Y2Y8 225 aaPredicted RBP17.08■□□□□ 0.32
CLTCL1-207ENST00000611723 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 TLL1O43897 1013 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 HUS1O60921 280 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 ITGB1P05556 798 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 LINC00271P0C7V0 271 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 CCDC172P0C7W6 258 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 FERP16591 822 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 TYMPP19971 482 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 FECHP22830 423 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 WARSP23381 471 aaKnown RBP17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 ZNF132P52740 706 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 CDH8P55286 799 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 CDK17Q00537 523 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 GOLGA8FQ08AF8 430 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 GOLGA8DPQ0D2H9 430 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 MEA1Q16626 185 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 IRF2BP2Q7Z5L9 587 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 UNC93AQ86WB7 457 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 APPL2Q8NEU8 664 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 ZNF558Q96NG5 402 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 DSEQ9UL01 958 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms