RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 OPHN1O60890 802 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 PROSCO94903 275 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 APRTP07741 180 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RBP3P10745 1247 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SERPINB6P35237 376 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 POLE2P56282 527 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SPIRE1Q08AE8 756 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 EAPPQ56P03 285 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CAPRIN2Q6IMN6 1127 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 LRRC71Q8N4P6 559 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CCDC33Q8N5R6 958 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 EMC1Q8N766 993 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 LENG9Q96B70 501 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM161BQ96MY7 647 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 PDCD2LQ9BRP1 358 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RAB6BQ9NRW1 208 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ANKEF1Q9NU02 776 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 DNPEPQ9ULA0 475 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 AHDC1Q5TGY3 1603 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 A6NJR5 290 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MED7O43513 233 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 EXTL3O43909 919 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KRT37O76014 449 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 NUDT17P0C025 328 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 GLI3P10071 1580 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 POLD1P28340 1107 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 RGS7P49802 495 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 ACTR2P61160 394 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SARNPP82979 210 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KDSRQ06136 332 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PKN2Q16513 984 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 DCAF12L1Q5VU92 463 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KCNV1Q6PIU1 500 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MFSD7Q6UXD7 560 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 TRIM50Q86XT4 487 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM71AQ8IYT1 594 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 RTKN2Q8IZC4 609 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PPP4R1Q8TF05 950 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 RNF34Q969K3 372 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 P2RX7Q99572 595 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 DNAI2Q9GZS0 605 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MIS12Q9H081 205 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SLCO1B3Q9NPD5 702 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PCYOX1Q9UHG3 505 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 R3HDM2Q9Y2K5 976 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 ATP5HO75947 161 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 STK10O94804 968 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PECAM1P16284 738 aaPredicted RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 NCF2P19878 526 aaPredicted RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SSTR1P30872 391 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CTCFP49711 727 aaPredicted RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 GPC3P51654 580 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 EPHB1P54762 984 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CENPCQ03188 943 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 RNASELQ05823 741 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 UGCGQ16739 394 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KLHL38Q2WGJ6 581 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 NXNQ6DKJ4 435 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SLFN11Q7Z7L1 901 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 FBXO41Q8TF61 875 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PSPC1Q8WXF1 523 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MTMR12Q9C0I1 747 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CYP26B1Q9NR63 512 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SMYD2Q9NRG4 433 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PSMC3IPQ9P2W1 217 aaPredicted RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 XPO7Q9UIA9 1087 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SMG5Q9UPR3 1016 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 NWD2Q9ULI1 1742 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 E2F8A0AVK6 867 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CBX6O95503 412 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KRT7P08729 469 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CCND1P24385 295 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PSMC4P43686 418 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MMP13P45452 471 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 NLRP11P59045 1033 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 MYBPC2Q14324 1141 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 C4orf19Q8IY42 314 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 TTC13Q8NBP0 860 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SPATA18Q8TC71 538 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 AGAP11Q8TF27 550 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 SHC3Q92529 594 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 CCDC124Q96CT7 223 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 TIPINQ9BVW5 301 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 KIF9Q9HAQ2 790 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 FZD1Q9UP38 647 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
SYNPO2-206ENST00000610556 PARP4Q9UKK3 1724 aaKnown RBP7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 IGLV3-22A0A075B6J6 115 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 F8VP50 259 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 RGL2O15211 777 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 BANF1O75531 89 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 ENO1P06733 434 aaKnown RBP7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 GHRP10912 638 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 SKIP12755 728 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 STAT5BP51692 787 aa7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 DRG2P55039 364 aaKnown RBP7.22□□□□□ -1.25
SYNPO2-206ENST00000610556 BCAR1P56945 870 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms